Detailed information of pspe_0.1.m1.60354.m1 in Pachyseris speciosa

Genomic Location: Sc0001009:68970...93430
NR annotation: CAH3160276.1, unnamed protein product [Porites lobata]
Species abbreviation PSPEC · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P33610DNA primase large subunit OS=Mus musculus OX=10090 GN=Prim2 PE=1 SV=1
O89044DNA primase large subunit OS=Rattus norvegicus OX=10116 GN=Prim2 PE=2 SV=1
P49643DNA primase large subunit OS=Homo sapiens OX=9606 GN=PRIM2 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005257 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04104
all species →		DNA_primase_lrgEukaryotic and archaeal DNA primase, large subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016558
all species →		FamilyDNA primase, large subunit, eukaryoticInterproscan
IPR007238
all species →		FamilyDNA primase large subunit, eukaryotic/archaealInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10537
all species →		DNA PRIMASE LARGE SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005658
all species →		Cellular Componentalpha DNA polymerase:primase complexInterproscan
GO:0006269
all species →		Biological ProcessDNA replication, synthesis of primerInterproscan
GO:0006270
all species →		Biological ProcessDNA replication initiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02685PRI2; DNA primase large subunit-DNA replication proteinsko03032deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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