Gene detail

Detailed information of pspe_0.1.m1.60443.m1 in Pachyseris speciosa

Genomic Location: Sc0001013:43049...53628
NR annotation: CAH3156036.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.60443.m1

GTGTAAACATGGCGGAGGGAGGACAGAGTTCGACTGCAAAAGAACAAACTTTGGAAGAAAATCTTGGAATGAGAGCTGTACTGATTGGAGCTACTGGCGCTATTGGCGAATGCCTGCTCGGCGAACTCTTGACTTCTAAGCACATTTCCAAAGTTGTTTCTTTGGGCCGAAGAAATGCCACAGTTCCAGCAGCTTACTCTGTTGATCAAAAAGTAGAGGAAGATTCTGGGAGGTTGGAGCAACACGTTGTAGATTTTGAAACCATTAGCACTGAAACAGTTGGAGAACAATTCAAAGACAAAGATGTGTTCTTTTGTACTTTGGGAACAACGCGGCGTACTGCAGGATCTGCTGCTGCTTTCAGGCATGTCGACTATGATTATGTGATGAACTGTGCAAAAGTTGCAAAAGAAGCCAATGTTTCACATGTGTTGTATGTGTCTTCACAAGGAGCCAAAGCTTCTAGCTGGGTTTCATATTTCAAAGTTAAAGCTGAGGTTGAAGAATCATTGAAGGAAATGCACTTTTTAAAGACGAGCATTTTCAGACCTGGTCTTCTAGACCGAGGGGACAAAAAGAGATTTGCAGAGAAGATGTATGGGTTGGTTGCTTCCTCTATTCCTGTTTCAAAAGTGGCCAAAGGTTTAGTCATTGAAGCTGTGAACTTTGCCAGGAGCAAAAAAAATGACAGCAACCAACAAGAGACATCCATCACTTATGACAATAATGATATCTTGGCATTACTGTCCGAAAACTAAAAACGATTTGTAGTCAATCAGGTTTCTTTCCCAGGATTGTGGAATTTTGTATACATTGTAATACACAAGCTTTCTATTCTGTCACAGAATCTTTATCAAGTGAGGAGTTTGACATTTTGTAACATGATTTAGTATCATGGAAAAAGCATGTATTGCCCCAGTAGATCACCAGGAGCTTGTATCTGCTGTCTTGATTTAGTGTTGAAGCATGGCAGTGTATTTTGATGGCCTCTCTAATTCATCTCTTGAGTGTGTCATCTTCCCTTGCAATGATCACAGAGGATGGAATATTAATGGTATGGAAAAAAGTATGCCCCATGTCCCTGCAAGGCGATCATCCACTGCAGTTGTCAATACTCTTCTAATATTACCATGCTCCTTCAGTCTGATTCCAAACAGCCTTGCAGTCTCACTGATGTAATCTGCTGTGCAATCTTTGCACTGAATTTTGTCGACCACTCCACATTTCTTTTTCTTGGTTGTGGGGTACTTTAGGTGTACCAGTTGTTGTCTTAAGGTTGGCACACACGAGGGTGAATGGTCACGGGGACCAGTTCCCTTCATGTGAACTAACAAAAATCTATTCACAGGAACCAAAATTTGATCCCTGCGAATGTTCCCACAAAATCAAACCTGTTTGAATTTGTAGGACCGTTTGCCTGGAACATTCCCCTGAAAAATGCTTgttcccttcgtgtgaactgtgCGTGGGAATATCCCCTGCTAACAATTTCACACTTTAATTAGATTTTCTTTGGTTGTTGTCTAGTTGTACTGAATAAAATATCCTTCCTTCaactcaaaaaacaaaaacttgttgAAAATGCAAATTACAAACACATAGTAAGTTTATAGACGAACAATGTGAGGCGTTATGAGCCTACACTGatttatttcaatgtattttgcaGCTCGTTATAATTTTACTGCATGCTATAACTTAAGCTTACGACATCCTGACTCTGCTGCTCATTTCTCATCTATTTTTCGTGAATTTTCAGtcaaaaagactaaaattataCTATTCCGTTCCCCCATGTAAATCCTTCAAGGTAATTGTGCCCGTCACTGGTTTTATTGTCTGAACTCTACAGGGGAGTATTCCCTGTGACCATTCCCTGTGAATATTCCCCTCATGTATGGTGACCTAAGGCTTGTGGTAAGCGCAGACTACTTGTCTTCTGAAGATTTGTGCAAGTTGTTCAGACACCCCAATGCTGAATTAAGACAGCAGATACACAAAGCTTGTGGTGGTCTACCAGCCATCCT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13460	NAD_binding_10	NAD(P)H-binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016040	Domain	NAD(P)-binding domain	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14097	OXIDOREDUCTASE HTATIP2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0051170	Biological Process	import into nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17290	HTATIP2; oxidoreductase	EC:1.1.1.-	Exosome	ko04147	deepkoala