Detailed information of pspe_0.1.m1.61291.m1 in Pachyseris speciosa

Genomic Location: Sc0001054:105304...118834
NR annotation: XP_015750785.1, PREDICTED: uncharacterized protein LOC107330734 [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00628PHDPHD-fingerDomainInterproscan
PF15299ALS2CR8Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR029309FamilyCalcium-responsive transcription factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47456PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan

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