Gene detail

Detailed information of pspe_0.1.m1.62012.m1 in Pachyseris speciosa

Genomic Location: Sc0001094:217984...224552
NR annotation: CAH3188409.1, unnamed protein product [Porites evermanni]
Species Pachyseris speciosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P22288	GTP cyclohydrolase 1 OS=Rattus norvegicus OX=10116 GN=Gch1 PE=1 SV=1
P30793	GTP cyclohydrolase 1 OS=Homo sapiens OX=9606 GN=GCH1 PE=1 SV=1
P50141	GTP cyclohydrolase 1 OS=Gallus gallus OX=9031 GN=GCH1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003703 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01227 all species →	GTP_cyclohydroI	GTP cyclohydrolase I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001474 all species →	Family	GTP cyclohydrolase I	Interproscan
IPR018234 all species →	Conserved_site	GTP cyclohydrolase I, conserved site	Interproscan
IPR020602 all species →	Domain	GTP cyclohydrolase I domain	Interproscan
IPR043134 all species →	Homologous_superfamily	GTP cyclohydrolase I, N-terminal domain	Interproscan
IPR043133 all species →	Homologous_superfamily	GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11109 all species →	GTP CYCLOHYDROLASE I	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003934 all species →	Molecular Function	GTP cyclohydrolase I activity	Interproscan
GO:0046654 all species →	Biological Process	tetrahydrofolate biosynthetic process	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006729 all species →	Biological Process	tetrahydrobiopterin biosynthetic process	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01495	GCH1, folE; GTP cyclohydrolase IA	EC:3.5.4.16	Folate biosynthesis	ko00790	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.