Detailed information of pspe_0.1.m1.62723.m1 in Pachyseris speciosa

Genomic Location: Sc0001136:38207...59627
NR annotation: CAH3176210.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F6P3G426S proteasome non-ATPase regulatory subunit 11A OS=Danio rerio OX=7955 GN=psmd11a PE=2 SV=1
F6XBL226S proteasome non-ATPase regulatory subunit 11 OS=Xenopus tropicalis OX=8364 GN=psmd11 PE=3 SV=2
Q8BG3226S proteasome non-ATPase regulatory subunit 11 OS=Mus musculus OX=10090 GN=Psmd11 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01399PCIPCI domainDomainInterproscan
PF18055RPN6_N26S proteasome regulatory subunit RPN6 N-terminal domainRepeatInterproscan
PF18503RPN6_C_helix26S proteasome subunit RPN6 C-terminal helix domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR040773Domain26S proteasome regulatory subunit Rpn6, N-terminalInterproscan
IPR050871Family26S Proteasome and COP9 Signalosome ComponentsInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR040780Domain6S proteasome subunit Rpn6, C-terminal helix domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1067826S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008541Cellular Componentproteasome regulatory particle, lid subcomplexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03036PSMD11, RPN6; 26S proteasome regulatory subunit N6-Proteasomeko03051deepkoala

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