Detailed information of pspe_0.1.m1.62802.m1 in Pachyseris speciosa

Genomic Location: Sc0001140:176769...193646
NR annotation: CAH3180566.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5RC94Next to BRCA1 gene 1 protein OS=Pongo abelii OX=9601 GN=NBR1 PE=2 SV=1
O08623Sequestosome-1 OS=Rattus norvegicus OX=10116 GN=Sqstm1 PE=1 SV=1
Q64337Sequestosome-1 OS=Mus musculus OX=10090 GN=Sqstm1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00569ZZZinc finger, ZZ typeDomainInterproscan
PF16158N_BRCA1_IGIg-like domain from next to BRCA1 geneDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR032350DomainNext to BRCA1, central domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP