Detailed information of pspe_0.1.m1.63119.m1 in Pachyseris speciosa

Genomic Location: Sc0001161:1714...47116
NR annotation: XP_029190474.2, A disintegrin and metalloproteinase with thrombospondin motifs 16-like isoform X2 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4VC17A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Mus musculus OX=10090 GN=Adamts18 PE=2 SV=2
Q8TE60A disintegrin and metalloproteinase with thrombospondin motifs 18 OS=Homo sapiens OX=9606 GN=ADAMTS18 PE=1 SV=3
Q8TE57A disintegrin and metalloproteinase with thrombospondin motifs 16 OS=Homo sapiens OX=9606 GN=ADAMTS16 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19236ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF17771ADAMTS_CR_2ADAMTS cysteine-rich domain 2DomainInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR045371DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR050439FamilyADAMTS and ADAMTS-likeInterproscan
IPR041645DomainADAMTS, cysteine-rich domain 2Interproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13723ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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