Detailed information of pspe_0.1.m1.6400.m1 in Pachyseris speciosa

Genomic Location: Sc0000009:1723455...1741869
NR annotation: XP_029201762.1, myelin expression factor 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P3U1Serine/arginine (SR)-type shuttling mRNA binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=hrb1 PE=3 SV=3
A0A0D1DZT6Serine/arginine (SR)-type shuttling mRNA binding protein OS=Mycosarcoma maydis OX=5270 GN=RRM75 PE=2 SV=2
Q8C854Myelin expression factor 2 OS=Mus musculus OX=10090 GN=Myef2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR050374FamilyRRT5/SRSF/Splicing Factor SRInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR003954DomainRNA recognition motif domain, eukaryoteInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24992MYEF2; myelin expression factor 2-Transcription factorsko03000deepkoala

TOP