Gene detail

Detailed information of pspe_0.1.m1.64179.m1 in Pachyseris speciosa

Genomic Location: Sc0001236:108720...122244
NR annotation: XP_020608168.1, Down syndrome cell adhesion molecule-like protein 1 homolog [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q98902	Neural cell adhesion molecule L1 OS=Takifugu rubripes OX=31033 GN=l1cam PE=3 SV=1
O35136	Neural cell adhesion molecule 2 OS=Mus musculus OX=10090 GN=Ncam2 PE=1 SV=1
Q07409	Contactin-3 OS=Mus musculus OX=10090 GN=Cntn3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051170	Family	Neural and epithelial cell adhesion domain-containing protein	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12231	CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043005	Cellular Component	neuron projection	Interproscan