Gene detail

Detailed information of pspe_0.1.m1.64239.m1 in Pachyseris speciosa

Genomic Location: Sc0001239:104983...117923
NR annotation: CAH3136771.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.64239.m1

GACGCCGTACTAGACCCAGACTCCACTCAGACATGCAGTCGTCCTTTCACGTTGCCgtcctcgatcttaaggtctctagtGTATTGGAAGGGGAGTTGGACATTCCTGCAATGGTGTAAAAAGATGGGTAAATTAATCACCAACATGGAAATGTTTTACACATCACTTAAACCAATCGTATTTCATGGCAACAACAGGAAGCatcaaaatttgaattttgaaCTTACAGGTTCTCTAGAATCAATAATTGACCACTTAGAAGGGAATGATCCAACTTGTGTTGTTATTTATGGTGAACCTGGCTCTGGACGTACAACACTCATGAGTAAGGTCTGTGATACACTCCTGGAAAGAAGTCTGAAACAATCTGAAATTTGTGGTTTGAGAGTGAGGGCGGGTTGCTCCATGCAGTCTCTGTGGAATTTTCTGAGTGGGATTGCAAAGGACAGACAAGATAAAGACACTGCCTCATTACTTTTGCAGTCAAGTGCCAAAGTAAGCAAGAAGTACAAGGTAGCACAAGCCTTCATTTCATCTAATTTCAAACTTGTCTGTATTGATGATTCATATTCAGATGGTGGAATGGTTTGGTCACACTTATCACAGTCATTGCTTAAAATAAAAGCCCATGTAATTGTTGTCAGCACAAGGAAAGAAGCTCCCCTCCTTGAAGCCACACTGACAGAGCAAACTGTCCTATCTGTGGAACTCAAAGGTGTTTGTGAGGATTCCTTGAAGCAATCCCTTAGTGACAAACTCCCTGATTGGAACTTAAGTGATGATCAGCTTTTGAGAATCTGCACCATACTGGATGGCAACCCAACATCACTGAAAATTTTGGCTAATACTATCAATGAATTTCAACTTCCACCACAGAGTTTGGACTCTGCTTTCTCAAAGTACTCTGAACATGTGAATGAAGAGGGATCTTCCAGTGTTGTTATGATACTCCAGTTTTTATTTCAATACTTGACAGCTTGGGAGAAACAAGTACTTGGTCAGCTTTGTCAGTTACGAGAGGCTCTTCCCCTGAGGACCGTGTCAGAAGAGATAGAAAAGCTTGTGAGACTTGGCTTGGTGGATAAAGAAGTCATCAGTGAAGATACAGGAACAAATAAGGGTATTTGCTCAATCTCAGTTGCTTGTTGCATTCAGTTGAGCTCCCTACAACTCACTGACACTTTAGACAGTGATGGTCTCAGCCCTGAAGCTCAGTTTCATTTCAGTGTCTTTGATCTGTGGTATGGTCTTCTTTCTGAAAAACTTTGCCAACTTGTAAGTGATGCACAAGGGAATGCTTGGCCATTTGTCCCTGAAAAGTGGCAGTACATAACAAATGTTGGAGCAGAGGAGAGGTACAATATAAAAGAACTGATAACAGCAAAGAACTCATTTGTGCCACATTTAACTGAGCAGGACATCTTGGAGGAGTGCTTGTTTCAAGCAGTCAAGGAGAAGATGTACAGTACAGTGGCAGCTCTAGTATTTGTCACAGACAGGTTCAGTTATTGGCAGGGAAGCTCGCACACAACTCTGCAACTCGTTGAGTACTTGAAGACTAACAGCTCTGACACAGCAATTGCACCTCAGCTGCTTATTAGAAAAGTCAGAGTTATGAAAAATGCTGGTGACTTACATgGTGCAGAACAAGCTCTTGATGAACTACTAGTTAAGAAGAGCCAAGTGGGTGAATGGGTTTACAAGAACAAACATGACCATCAACTGGTCAGTGCTGTTTGCATTCAGATTAAAGGTGATATTCAGTACAACCTTGGACAGTGGCTGCAAGGAGCCAAGCTGTTAATTGAATCGCTCATTTTATTCAGCACACTTCCCATTCCAGATACAAAGGGCATCTCATCTAGCCTTGCTATTCTAGCCAATTGCCTTGAACAGATGAGTGTGAGTGAGTATATTCCATTGGCCCAGATGTATGGCCTGACAGCATCCCACCCCCTTCTGCAAGCCTACTACTGCTCACACGAATCTGCCCTGAGATCGCAGTACACTCCATTGTTTTATGctagacacaagGTACTAAGGCTGAATGGAGATGTGACAGTGTGGACATTGCCTGCTCACAATCAGctggtgataatgatgacaatgaatgatgatgatgatggtggcagTGGTGATTGGTGA

Transcript

pspe_0.1.m1.64239.m1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002182	Domain	NB-ARC	Interproscan
IPR043529	Family	Alpha-protein kinase 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46747	ALPHA-PROTEIN KINASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043531	Molecular Function	ADP binding	Interproscan
GO:0002753	Biological Process	cytoplasmic pattern recognition receptor signaling pathway	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005929	Cellular Component	cilium	Interproscan
GO:0045087	Biological Process	innate immune response	Interproscan
GO:0048029	Molecular Function	monosaccharide binding	Interproscan