Gene detail

Detailed information of pspe_0.1.m1.64351.m1 in Pachyseris speciosa

Genomic Location: Sc0001247:24573...26952
NR annotation: KXJ21005.1, Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6NNI3	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1 OS=Arabidopsis thaliana OX=3702 GN=LSH1 PE=1 SV=1
Q9M836	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 2 OS=Arabidopsis thaliana OX=3702 GN=LSH2 PE=1 SV=1
Q9LMK2	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04852	ALOG_dom	ALOG domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013762	Homologous_superfamily	Integrase-like, catalytic domain superfamily	Interproscan
IPR006936	Domain	ALOG domain	Interproscan
IPR011010	Homologous_superfamily	DNA breaking-rejoining enzyme, catalytic core	Interproscan
IPR040222	Family	ALOG family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31165	PROTEIN G1-LIKE2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0009299	Biological Process	mRNA transcription	Interproscan