Detailed information of pspe_0.1.m1.64831.m1 in Pachyseris speciosa

Genomic Location: Sc0001283:196833...203223
NR annotation: XP_020600602.1, aspartate aminotransferase, cytoplasmic-like, partial [Orbicella faveolata]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P00504Aspartate aminotransferase, cytoplasmic OS=Gallus gallus OX=9031 GN=GOT1 PE=1 SV=3
P13221Aspartate aminotransferase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Got1 PE=1 SV=3
P33097Aspartate aminotransferase, cytoplasmic OS=Bos taurus OX=9913 GN=GOT1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001598 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00155
all species →		Aminotran_1_2Aminotransferase class I and IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004839
all species →		DomainAminotransferase, class I/classIIInterproscan
IPR000796
all species →		FamilyAspartate/other aminotransferaseInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11879
all species →		ASPARTATE AMINOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009058
all species →		Biological Processbiosynthetic processInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0004069
all species →		Molecular FunctionL-aspartate:2-oxoglutarate aminotransferase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006520
all species →		Biological Processamino acid metabolic processInterproscan
GO:0006532
all species →		Biological Processaspartate biosynthetic processInterproscan
GO:0008483
all species →		Molecular Functiontransaminase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.64831.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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