Gene detail

Detailed information of pspe_0.1.m1.65108.m1 in Pachyseris speciosa

Genomic Location: Sc0001304:157271...159761
NR annotation: CAH3182385.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.65108.m1

ATGGCAGAGAGCGTTGGAGAAATTGTCCTAGATCTCAATGGATGCCACGCCTTGGCCAAGGGAGAGGGGGACTTTTCTCGACAAAAAACAACCAATTGCAATCTCAACAATGCAAATGAAAACAACCAGAAAACCACCGAGTACCACGAGAAGCATCTGTCAATAGCGAGAGAGGTAGGCGATAGAGCTGGAGAGGGAAAGTCCTTTTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGAAGGATCTGTCAGTATCGAGAGAGATAGGCGATAGAGCTGGAGAGGGACGGGCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAAGTTCCAGAAGGCCATCGAGTACCACGAGTCGCATCTGTCAATAGCGAGAGAGGTAGCCAATAGAGCTGGAGAGGGAAAGTCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAATTTCCAGAAAGCCATCGAGTACCACGAGAAGGATCTGTCAATAGGGAGAGAGGTAGGCGATAGAGCTGGAGAGGGACGGGCCTATTGCAATCTTGGCAACGCGTATCACAGCCTTGGAAACGTCCAGAAGGCCATCGAGTACCACGAGAAGCATCTGTCAATAGCGGGAGAGATAGGCGATAGAGCTGGAGAGGGAAAGTCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAAGTTCCAGAAGGCCATCGAGTACCACGGGTCGCATCTGTCAATAGCGAGAGAGAGCTGGAGAGGGAAGTCCTATTGCAATCTTGGCAATGCGTATCATAGCCTTGGAAACTTCCAGAAAGCCATCGAGTACCACGAGAAGGATCTGTCAATAGCGAGAGAGAGCTGGAGAGGACGGGCCTATTGCAATCTTGGCAACGCGTATGACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGAAGCATCTGTCAATAGCGAGAGAGATAGGCGATAGAGCTGGAGAGGGACGGGCCTATTGCAATCTTGGCAATGCGTATGACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGAAGCATCTGTCAATAGCGAGAGAAGTAGCCAATATTGTTGGAGAGGGAAAGTCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAAGTTCCAGAAGGCCATCGAGTACCACGAGAAGCATCTGTCAATAGCGAGAGAGGTAGCCAATAGAACTGGAGAGGGAAAGTCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAAGTTCCAGAAGTCCATCGAGTACCACGAGAAGGATCTGTCAATAGCGAGAGAGGTAGCCAATAGAGCTGGAGAGGGACGGGCCTATTGCAATCTTGGCAACGCGTATCACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGAAGCATCTTTCAATAGCGAGAGAGGTAGCCAATAGGGCTGGAGAGGGAAAGTCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGAAGGATCTGTCAATAGCGAGAGAGATAGGCGATAGAGCTGGAAAGGAACGGGCCTATTGCAATCTTGGCAATGCGTATGACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGTCGCATCTATCAATAGCGAGAGAGGTAGCCAATAGAGCTGGAGAGGGAAAGTCCTACTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACAAGAAGGATCTAAGGCCATCGAGTACCACAAAGAAGGATCTGTCAATAGCGAGAGAGGTAGCCAATAGAACTGGAGAGGGACAGGCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGAAGCATCTGTCAATAACGAGAGAGATAGGCGATAGAGATGGAGAGGGACGGGCCTATTGCAATCTTGGCAACGCGTATCACAGCCTTGGAAACTTCCAGAAGGCCATCGAGTACCACGAGAAGCATCTGTCAATAACGAGAGAGGTAGCCAATAGGGCTGGAGAGGGAAAGTCCTATTGCAATCTTGGCAACGCGTATGACAGCCTTGGAAACTTCCATAGGGCCATCGAGTACCACGAGAAGGATCTGTCAATAGCGAGAGAGATAGGCGATAGAGATGGAGAGGGACGGGCCTATTGCAATCTTGGCAATGCGTATCACAGCCTTGGAAACTTCCAGAAAGCCTTAGAATATTACCAGTTAAGTGTTGAGATGCGAAATATTATCAGGGCCAGCATTAAGTCTGAAGAGGCTTTGAAATAA

Transcript

pspe_0.1.m1.65108.m1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00515	TPR_1	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15837	GPSM2; G-protein signaling modulator 2	-	Cilium and associated proteins	ko03037	deepkoala