Detailed information of pspe_0.1.m1.65160.m1 in Pachyseris speciosa

Genomic Location: Sc0001308:54294...64870
NR annotation: CAH3178270.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P27590Uromodulin OS=Rattus norvegicus OX=10116 GN=Umod PE=2 SV=1
Q91X17Uromodulin OS=Mus musculus OX=10090 GN=Umod PE=1 SV=1
Q862Z3Uromodulin OS=Canis lupus familiaris OX=9615 GN=UMOD PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051022FamilyNotch Signaling and Cell Fate DeterminationInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24049CRUMBS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP