Gene detail

Detailed information of pspe_0.1.m1.6653.m1 in Pachyseris speciosa

Genomic Location: Sc0000010:2758474...2766576
NR annotation: XP_029189117.2, cytochrome P450 4c21-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.6653.m1

CTCATTTGTGTGGGGTAGCTGTGGATTCGCTGTGTCACAATCGATTCGCCGTCTAACATTTCTGACTTTGTGGACATTTGATCAGGTTGCTTCGCCAAAATGATGTTGGAAACACTAACCAGCTTGTGCAGCTGGAAATTTGCACTTCTGTGTATACTTGAACTCCTCATTTTATGGCTTGTCTACAAATTTGTGGAAGAAAGATTGTCACCATTACAGAAGATTCCTAGACCGCCAGGTGGCTTACCTTTGATCGGTCATCTCTTCACCCTCCTTCGCTGCGGAGGTTTACTAGAGATGATGCGGACTTGGACAGAACAatatccatccatttttgttttgcatccAGGATTTGGGATTGGAATCGGTGGCCATCGTGTGTATGTTACAGATCCTGAACTTGTTAGATttgtaacaataaaaaatgcacACAAGTTCGATCGTACCGACTTTGTGGCCAAGGTGATTCCGAGTGTAAGCAAAGGTTTGGTTGCTGTAGTTGGGAAGGCACATGCACGGCAGAAAAGAATGATTGGTCCGGCATTCAGCTCAGCTAATTTAAGAGGATTTTTGAACATCTTCCAAGAAAATACAGAAAAACTTGTTCAGtggtGGTCCAACCAACTGAAAAGCACAAAACCAGGACATTCTATAGATTTAGAGGTTGTAGGAGAGTTAAGCCATCTCACGCATGATGTGATTGGGCAAAGTGCATTTGGCTACAACTTCAACACCATTCTGGGTGGTGACAGCAAAGTTTCTGAAGCTTTTGCTAGGGTACTGCAGGGACTGAACTTCAGATATGTCATCTGCAAGTATTTGATTCCCTACTTTGAATACCTGCCATTAGCCGAAAACAAGAAAATGCAATCTGCAAAGGAGATTGCACATAACATTGTATTGGAGGTTATTCAAGAGCGTCGCAGGCTAAAAAGTGAAGGCAGTTATGCACCAAAAAAGAAAGATCTGCTGGACTTGTTGATGGACATGTATGATGAAGAAACTCACTCCAGAATGAATGATGAAGAATTGAGATCCCAAGTATTTACCTTCATTCTGGCTGGCAATGAGACAACTAGTGTTGCCTTGTCCTGGACACTTTATGAACTCGCCAGAAATCCACACGTTCAAGAAAGGCTGAGAGCAGAGGTGCAGGCGGCCTTCTCAGATGACCAGGAGCTGACTTGGGAAAAGCTGGAGAAGTTACACTACCTGGGGAATGTTATTAAAGAATCACTGCGTCTTCACTCCCCAGCTGACGTCACTGGCCGTGTTGCATTAGCAGATACTGAGATTGCCGGGTATCATGTTCCTGCTGGAACACAGGTTATATTCCCCATAGACGCCATACAGCACTCTTCGCGTTACTGGTCCAATCCTGAAATGTTTGACCCACAACGATTTGAAGAAAATGGTGGCCAAACTAACGTCCAGCCGTTCTCACATTTCCCATTCGGGTGTGGCCCGCGCATGTGTATTGGCAACAAGTTTGCTCTGATGGAAATGAGAGTGGCTTTAGCCATACTAGTGAAGACATTTTCTTTCCGTGAAGTCCCTggttgtgtggtgaaagaggtGACTCGAATTACCACTCATCCAGTTGGCCTGAAGTTGCGTGTTGAACTGGTGGAGCGCTAATAACAAGAAAAGGATCATAGTCTCCCTGGAAGAGATTTTCGTCTGTTAGAGCTATTAGGGTGCGTTTAGTTTGGCTGGAATTGTTACTCCCATTCAGGATTTAATTTTCGCGATTTTTTGCCGAGCAATGCGCGAAAATGAGCAGTTCAAACCTCATCAGTGCAACATGTCGCAGCTAGTTCCATGGAACTGATTATATGCTGTTCACTGAGCGTACCTTAAGAATATTTATTTGCTAAGTGGTCGGcaatttttttcagattttagcATTTCATAGCACACCATATAGATAAAGAATAAAAGCATTTTGTAGAATTACCTCGCTCGAGAGCACgagttttcattttaaagacCACAAATATTACATGACATGCAATATAAATCGTTTTTAAAACGCGTACCGTACGCCGACCTTTATACaggttttaaaattaaaagcaCGAGGTACTTGTCAGTATTTTTGGATAACTATGAACTTTTGTAATTTCAATGATTAAATTGCTGTCAGTGAGGCAAATCTTGTTGG

Protein

Uniprot

Uniprot term	Description
Q64481	Cytochrome P450 3A16 OS=Mus musculus OX=10090 GN=Cyp3a16 PE=2 SV=2
Q64459	Cytochrome P450 3A11 OS=Mus musculus OX=10090 GN=Cyp3a11 PE=1 SV=1
W8JWW3	Cytochrome P450 72A225 OS=Catharanthus roseus OX=4058 GN=CYP72A225 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR001128	Family	Cytochrome P450	Interproscan
IPR050196	Family	Cytochrome P450 Monooxygenases	Interproscan
IPR002401	Family	Cytochrome P450, E-class, group I	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24291	CYTOCHROME P450 FAMILY 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07424	CYP3A; cytochrome P450 family 3 subfamily A	EC:1.14.14.1	Cytochrome P450	ko00199	deepkoala