Gene detail

Detailed information of pspe_0.1.m1.66768.m1 in Pachyseris speciosa

Genomic Location: Sc0001446:33710...52225
NR annotation: KAJ7389150.1, hypothetical protein OS493_033236 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.66768.m1

aagaaaaatggcacatcagaTTGCGTTTGGGAATTCTTTCGCGATAGAGGGCCTGACTGCTTACATCTTGACTTCACGAAGGGGACTTTGAGCgtgatgctcaacgagtttgctggaattcaaaaagtatctgatgagtctcttggccgagacgaaacgccgcTACATGGTGGATGGGGTAATTGGGGAGGATGGTCAAATTGTTCCGTGACGTGCGGAGGTGGCTTAAAGACGCGCAGTCGCCTTTGCAACAATCCTACACCAGCTTATAATGGGAGAAATTGCATTGGAAACAGCTCAAAATCACAGCAGTGCATCCCCCGGCAATGTCCACGTGAGTCAATTTATACTTCTAAGATATATAAAACGATGCCTCTAGCTAGCGACTCTGTTAATAATTTGATTCGCTTAAGGTTGTCTCTTACCAGTCGATATCAAGTGAATGGTAGTTGGGGTAATTGGGGAGGATGGTCAAACTGTTCCGTGACGTGCGGAGGAGGCTTACAGACGCGCAGTCGCCTTTGCAACTATCCTGCACCAGCGTATAATGGGAGCGACTGCAATGGAAACAGCTCAGAAACACAGCAGTGCAACACACGGCAATGCCCAATACATGGTGGATGGGGTAATTGGGGAGGATGGTCAAACTGTTTCGTGACGTGCGGAGGAGGCTTACAGACGCGCAGTCGCCTTTGCAACTATCCTGCACAAGCGTATAATGGGAGCGACTGCGATGGAAACAGCTCAGAAACACAGCAGTGCAACACACGGGAATGCCCAATACATGGTGGATGGGGTAATTGGGGAGGATGGTCAAACTGTTCCGTGACGTGCGGAGGAGGCTTACAGACGCGCAGTCGCCTTTGCAACAATCCTGCACCAGCGTATAATGGGAGCGACTGCAATGGAAACAGCTCAGAAGCACAGCAGTGCAATACACGGCAATATCCAGCAACTAGGACAAATACAACCACAGCGACACCGACAACTACAAGCGTGGAAGAAATGGTAGCGCGTTCCatagcaaaaataaaaactctCAGAACAACCGACGAAGACTCTTTGATGAATGCAGTGGAGATAATCAGCAGATTATTAAAGGCATTGGAAAAGGAACCTGTCAAGAAAAATGCCGTCAATGTGCTGCTAGCCACTCGGGAGTTGGAGTCCTTTGCCAGTAATTACAGCAAGATTTATTTCAAAGCAAATGAGAGTCGGGTTATTTACAAAGAACACTTTGCGattaaaatcaagaaactaTCTGCAGACAGCAAGTCTGGAGTTGTTTGCTCGTTGAATGAGACGGAAAACTACTCTAATGAAACAAGAGAGAGTATTTCCATACCTCCCCAAGCCTTCGATGGCAAAGAGGCAGAGGCTGCGGTTGTATGCCTTATTTATAACAACGTCAAGAAATGGCTCTCAGAAGATATGCAAACTCAATTGCACAATAATAACGAGGTCCTCATGTTGGGAAGCCGGATAATTGCCGCAAGTGTTTATCCCGAGCCGCCTGGTACTCTTCAAGAAAATGTCACCATATTTTTGAGAAACTACAACGAATTCAAGAAGAAAGACGTACCGCATTGCCGTTTCTGGGACTTCGATACCAAATCCACAATGAACGGCTCATGGTCCAGCAGAGGGTGTTCGCTGGTACGATCATTCAACAATGAAATCACTTGCTCTTGCAATCATCTCACgaattttgctgttttgatgCAAGTTAAGGAAAGTAAGGGCGTTTCAAAGGGGCACAGGTTGGCGTTGGAAGTCATCACTTACATTGGTTGTGCCCTGTCACTTACTGGAGCAGTGCTTACTATCATAGTATATTGTGTCCTTATGAATTTGAAACAGGAACAAATTCAAATTCGTCTTAACCTTGTGGTTGCCATAGCGATCGCACAAATTGTCTTCCTTTCCGGAATTAGTGCCTCGGAATCAAAGGGTGTGTGCGTTTTCGTGGCAGCATTGATCCATCTTTTCTACCTCGCTGGATTTGCTTGGATGTTGTTTGAAGGAGTTTACTTGTACCTGATGGCGGTGAAAGTGTTTAATGTCGTGGTCAAAATGCGCCTGTTCTATGCAGTTGCTTGGGGTCTTCCTGTTGTAATTGTAGCACTGTCAATTGTCATTGCGTCCAGTCAAGATGGAGGTGTATTCAGCTATGTGCATGGCGACTTTTGCTGGGTTTCCTTCAGTAACAACATGATCTGGACCTTTGTCACTCCTGTTCTTCTAGTATGCATGATAAACTCGGTGCTCCTTGGGCTAGTGATTCGCGAAATCCTGCAAATAGAGAGTTATAACACGTCTGAGATGGACAAACTGAGACAAGTTACAAAGGCATATGTGGTTCTTCTGCCTCTTCTTGGAATAACGTGGGTGTTTGCTATCCTAAGCGTCACTAATGTTGGTCTCGCCTTTCAGTACATCTTCACCATCCTCAACTCTCTACAGGGTTTTCTCATCTTCATACTTCACGTTGTGAGAAATGGTGATGTTCGTGCAGAATTCCGACGTATAAAACAAAAGTGGAAAGATGCGAGGAGTATCCAAGCTTCTCTATCCTGGAATCAAGACCCAAGCGACAGCTGGACCAACCGAGTGATGAAAAGTGACGCACACGAGTTGAAAAGCAGGGGCAACGAAACCTCCTCTTGGCCATCAAGTGGATACGACAATGCCTTTGTTTTCCACGGGGAGAAATGCATGACTCCTGTAGGCACTTGA

Transcript

pspe_0.1.m1.66768.m1

Protein

Uniprot

Uniprot term	Description
A6QLU6	Adhesion G-protein coupled receptor D1 OS=Bos taurus OX=9913 GN=ADGRD1 PE=2 SV=1
B3EWZ3	Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
C0HL12	Adhesion G protein-coupled receptor B1 OS=Rattus norvegicus OX=10116 GN=Adgrb1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF16489	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR032471	Domain	GAIN domain, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12011	ADHESION G-PROTEIN COUPLED RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08465	ADGRD1, GPR133; adhesion G-protein coupled receptor D1	-	G protein-coupled receptors	ko04030	deepkoala