Detailed information of pspe_0.1.m1.66798.m1 in Pachyseris speciosa

Genomic Location: Sc0001449:87114...96852
NR annotation: XP_020619363.1, glutamate receptor ionotropic, kainate 3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BMF5Glutamate receptor ionotropic, kainate 4 OS=Mus musculus OX=10090 GN=Grik4 PE=1 SV=2
Q16099Glutamate receptor ionotropic, kainate 4 OS=Homo sapiens OX=9606 GN=GRIK4 PE=1 SV=2
Q5IS46Glutamate receptor ionotropic, kainate 4 OS=Pan troglodytes OX=9598 GN=GRIK4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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