Detailed information of pspe_0.1.m1.66975.m1 in Pachyseris speciosa

Genomic Location: Sc0001466:76195...90199
NR annotation: CAH3034073.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q15696U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 OS=Homo sapiens OX=9606 GN=ZRSR2 PE=1 SV=2
Q15695U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 OS=Homo sapiens OX=9606 GN=ZRSR2P1 PE=1 SV=2
Q64707U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like OS=Mus musculus OX=10090 GN=Zrsr2-ps1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
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 InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR009145FamilyU2 auxiliary factor small subunitInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0089701Cellular ComponentU2AF complexInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0030628Molecular Functionpre-mRNA 3'-splice site bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24273ZRSR; U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein-Spliceosomeko03041deepkoala

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