Gene detail

Detailed information of pspe_0.1.m1.66982.m1 in Pachyseris speciosa

Genomic Location: Sc0001466:102118...105955
NR annotation: CAH3024648.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.66982.m1

ATGGAAGCTGTGATTGAAGCAAACAACAAGTTCTCTGTGGAACTCCACAAAGCTCTCAAAATTGATCAGCAATTCGCGGGTGAAATCCTTTTTTCTTCACCAAGCAGTTTGAGTATTGCACTTGCTATGACTTTCATGGGAGCAAGAGGCAACACAGCTGAGCAGATGAACAAAGCTCTCCATTGGGCAGGACTGACTCAAGATCAACTCCACACCGAACAACAACACTTTCTTAAAACTCTGCAGGAATCCAATGCTGCTGGGAACGAATTGCTGGCCGCGAATCGCCTGTTTGTGCAGAAGAATTTCAGCTTGGTGCAAGAGTTCGTCGAGGGAACAAGAAAATTCTACGATGCTGAGATAGCCTTGGTTGATTACCAGCAAGATGCTGAGGGAGCAAGCAAAGAGGTGAATGGATGGGTTGAAGAGAAAACCAAGCAGAAGATTAAGAATTTGATTCCCCAGGGAGTGTTTAAATCCCGTACTAGACTGACCCTTGTGAATGCTATTTACTTCAAAGGGTTCTGGCAAAGCCAGTTTAAGAAAGAAGCCACTTTTCCCCAGCAATTTTTTGTCTCCGAAAGTGAAAAAGTGGAAGTACAGATGATGCACTTAACAGAAACGTTTAATCATGTTGAAGATGCTGAGGAGCTAGGCTGTCAAGTGCTTGAGTTGCCCTACCAGGGGAAGGATCTTTCCATGGTTATTCTGCTACCCCATAACACCCATGGGCTGGCCAAGTTAGAGGAAGATCTCACCCATGACAAGTTAAACAATGTTATTCAATCCGTAAGAAAGTCACATTCTCACAAAGTGGAGGTCTCCCTGCCAAAATTCAAGCTGACAcagcagtttctcctcaatgaCATCCTGGCAAAAATGGGAGCAACAGATATGTTTGATGAGTTTAAAGCTGATTTTACAGGAATTACACCAGGCCCTGAGAAGATCTATGTGTCCCATGTCATTCACAAGGCATTTGTGGAAGTAAATGAGAAAGGCACCGAGGCTGCTGCGGCAACAGGTGTGGTCATGATGGGTCGCATGGCTTTGATGAATCCTATCTTCTGTGCTGACCACCCATTCTTGTTTATGATTTGCCATAACAAGTCCAGTGCAATTCTATTCATGGGCCGTGTGATGAAACCAGAAGTGGTGGAAatctccaaaatgaaaattgtgATTGAGGGAAACAATAAATTTTCTGTGAAACTCCACAAAGCTCTAAAAAATGATCAGCAATTCGTTGGTCAAAACCTGTTTTACTCACCGAGCAGTTTGAGTATTGCACTTGCCATGACTTCCATGGGAGCAAAAGGCAACACAGCTGAGCAGATGAACAAAGCTCTCCATTGGGAAGGACTGACTCAAGATCAACTCCACACCGAACAACAACACTTTCTTAAAGCTCTGCAGGAATCCAATGCTACTTGCAACGAATTGCTGGCCGCGAATCGCCTGTTTTTGCAGAAGAACTTCAGCTTGGTGCAAGGGTTCGTCGAGGGAACAAGAAAGTTCTACGATGCTGAGATAGCGCTGGTTGATTACCAGCAAGATGCTGAGGGCGCAAGGAAAGAGGTAAATGGATGggttgaagagaaaacaaagcagaagaTTAAGGATTTGATTCCCCAGGGAGTGTTTAACCCTCTCACTCGACTGACCCTTGTAAATGCTATTTACTTCAAAGGGTTTTGGCAAAGCCAGTTTAAGAAAGAAGCCACTTTTCCTCAGCAATTTTTTGTCTCCGAAGGTGAGAAAGTGGAAGTGCAGATGATGCACTTAACTGCAGAGTTCAATCATGTTGAAGATGCTGAGGAGCTAGGCTGTCAAGTGCTCGAGTTGCCCTACCAGGGGAAGGATCTTTCCATGGTTATTCTGCTACCCCATAACACCCATGGGCTGGCCAAGTTAGAGGAAGATCTCACCCATGACAAGTTACACAAGGCTATTCAATCCGTAGCAGAGTCACATCCTCACAAGGTGGAGGTCTCCCTGCCAAAATTCAAGCTGACAcagcagtttctcctcaatgaCATCCTGGCAAAAATGGGAGCAACAGACATGTTTGATGAGTTTAAAGCTGATTTTAAAGGTATCACACCAGGCCCTGAGAAGATCTATGTTTCCCATGTCATTCACAAGGCATTTGTGGAAGTAAATGAGAAATGCACTGAAGCTGCGGCAGCTGCAGCTGTGGTTATGATGGCTCCCACCGGCTTGCTCAGGAGGAACCCCATCTTCCTGGCTGACCACCCATTTCTGTTTACGATTTGTTATAACAAGTTGAATGCAATTTTATTCATGGGCCGTGTGATGAAACCAGAGCCATCTTTTGAGTAA

Transcript

pspe_0.1.m1.66982.m1

Protein

Uniprot

Uniprot term	Description
P30740	Leukocyte elastase inhibitor OS=Homo sapiens OX=9606 GN=SERPINB1 PE=1 SV=1
P05619	Leukocyte elastase inhibitor OS=Equus caballus OX=9796 GN=SERPINB1 PE=1 SV=3
Q4R3G2	Serpin B6 OS=Macaca fascicularis OX=9541 GN=SERPINB6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00079	Serpin	Serpin (serine protease inhibitor)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000215	Family	Serpin family	Interproscan
IPR042178	Homologous_superfamily	Serpin superfamily, domain 1	Interproscan
IPR023796	Domain	Serpin domain	Interproscan
IPR042185	Homologous_superfamily	Serpin superfamily, domain 2	Interproscan
IPR023795	Conserved_site	Serpin, conserved site	Interproscan
IPR036186	Homologous_superfamily	Serpin superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11461	SERINE PROTEASE INHIBITOR, SERPIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004867	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0005615	Cellular Component	extracellular space	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13963	SERPINB; serpin B	-	Peptidases and inhibitors	ko01002	deepkoala