Gene detail

Detailed information of pspe_0.1.m1.67635.m1 in Pachyseris speciosa

Genomic Location: Sc0001537:4030...16942
NR annotation: XP_022791496.1, major facilitator superfamily domain-containing protein 4A-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.67635.m1

CAAAAATTTCGAATGTTTTGCAAGGGTGTGATGGAGTTCAAGGCTACGCGCTAACGCGGAGCGGAAATAACTTCAGTGCCTTGGTTTAAAGACAAGAAAAAATAACTTTCCAAAGCCGGATACAGTTGTTAAAAGACATCTTTCTGAGAGAAATGGTTTAACACAAGACGGACTGTTTTCTCTGAATTTTGGAGTTATTTGGAAGTGAGCGAATACCTCATTGAATTTCACCGGTTTACTGAGCTTTGAATGTTTCTTAAGATGTTGGAAAAATTCGAAGTTGTGTGATTTTTAAAGGCATAAATATCCCTACGGAAACTGAGGGAAAAACTTCGAAGTATTTTCACCAGCTTGAAGTTTGGTTCTTCATTCGAACTCATCAACAAGGTCGAATTTAGTTAATTTTAATGTGCCTCGAGCATTTTTAACGCACTTTCGAGGACTAGAGTACGTTATCAAGGGGAATACTTCAAGGAGTTTCCTCTACCCAAAAAAACTCGTTGATAGCTTGTAAACTGAAAGTTTCACCAACTGACAAGAAACTTTGCCATCATGAGAGTCGGTATGGAATCTTCATCCGACGAAGACGAGCCACTTTTCAACATGGAGGATGTCGAACGCCGAACGTTTGAGAAAGATAAGGAGCTGCCACTATGGAAACGCTTTCTCATTACCTTGAAAAAACTTGGCGAGGATAGAAACAGCCTTAAGTCTACGATCTGCTACTGCGGAGTTTTCATGGTGTTTGGAATGTCCGACGAAATCTTAGGGCCAACACTACTGGAACTTAAATGCCTGACTGGGAAGTCTATAACAGTGATGAGTgtgttattttttgttcatgacTTGTGCAATGTCTTTGGTTCTACATCGGGTGGATATCTCGTAGATCGTTTCAACCCCAATGTTTTGGTGACGATAGCTCTTGGTCTCAGCGCCATGTGTATTATAGCCATCCCTCTCAGCCGGATCTTTGTCAtcttgctgtttttggcggGAATATTTGGCGGGTGTTTTGGCGCCACGGATACCTTCACAACCGTGCAGCTTATACGCATGTACGGCAAACAGGTTTCACCGTACTTACAGGCTCTTCACTTCTCTTATGGTGTCGGAGGCTTCATAAGCCCGTTGGTTGCGCGGCCTTTTCTGCGACGTCGCTGTGTGCTAGTTGTTAACTACACGACTATCATCGATGAGTGGCCGTACGCGAATTCCACCACCGGTATTGATAACTCCACGCACATATTTCAGACACAGGAAGAGACACACCGTGATACGCATGTGCGATGGGCCTACTGGATTGTAGCATTAGTGCATCTTCCAGTAATATTTGGCTTGCTGTGGTTGATGTTCACCCGCAAGTTGGCAAAAATCACTGGAACACTCAAGAAATACGAGTATGAAATGTATGATGAACAGAGACTTAATAATCCTGGTTACAATCATCACATGGTCACTCTGTACCTGAATGGAAACCCGCCCTGGCTTAAGGTGTTTGGTGATGATCAAAAACCCCGGGTAGTTCTCGTCACAGTGCTGACGTCACTTATCTTACTTCTGTATGATGGATTGATGGCCACATTTGGAGCTTATGTGTACTCGTACGCTGTTAAAGGTGCAGTGCACATTAAACCGAGTCATGCGGCGTACCTCAACTCTCTCTTCTGGGGTTCGTTGTCTGTCGGTAGATTCGTTTCCATTCCAGTGGCGATGTATGTAAAGCCTCCAACGATGCTGATGATAAACTTGGTTGGTTGCATTTCGTCAATTCTATTCATGTTAATCTTTGAAAAGAGTGAGCCCGCACTATGGTTAGGAACCAGCGGTGCTGGGCTTTTCATGAGTAGTGTCTTCCCTACAAGCATTGCGCTCGCAGAGTATTACATCGACCTGACAGctcCTGTGACAAGTGTTATGATCGTGAGCGCGGCATTAGGAGAACTTATACTACCCCTGGTAGTTGGACAGGTTTTTGAGCGCCTTGGTCCCGTTAGCTTTCTAGCAATCGCCTTCTGCGCATGCTTTATGGCTCTGATGATTTTCATTCTCTTGAGGTCAGCTGAAAAATCAGAGACGGACTGGCTGGGATTTTTCTGGTTTGTTTGGTGTGGCAATCCACCCAGCTCTGCCAATCAACCCACTCATCAGAACAATAACCCCGACCCCACCCCTACTGTGGAGACAGGCGAAAGCCCACCAATAAACACTGTAGAACTTAACATCCAGGGATAGCGCAACAAACAATCTTGTTTTAGTTCAATATAGAATTTTAATGTCAAATGATTGTTTTAATGGTTGTTTTAAGACGAATTGAGAAGGTTTGGTTTTACTTTTTGCTTTGGGCAAGTCCTGCATTTCTCGCTTCAAAATTATCACATTATGATCAGTCTCAGTTACCTTGCTACAAAAAATCTcacttttcccgcgctttgcaccggttaCAAGTTtccccgcgctttgcaccggttacatgttttcccgcgctatGCACCAGTTAGATGGCTTCCCTCCCGCTCTTTGCATCTGTTACGTGTTTTTCCGCGCTTTGCATCAGTTGCATTTTTCCCCGTGCTTGGCACCGGTTGCGTACTTAACACACTTGTCActatgttttcccgcgcttagatCGGTTCTCGGTTGCATTTTGGCATGGTCTTTATTGGGTTATATTTCCCTTGTTCCTGTGCTTTGCAAAAGGAATCCTTAATGTAATCCTTAAAGTCAAACGCAGACTGCTGTAAAAATTAATATGGTGAAAAACAGATTTAAGAATTGGGCAAAGTATTGCATGTTTGGGTGATTGGGGTTAAAATAAATTGTTGGAGGCACAACCGTAAATTTGAAAAGTACGTCAGTCTTGTTCGATTTCagatggggagcagggttggcgcagtggtcagagcgctcgccttccaccaatgtggcccgggttcgattcccggactcggtgtcataagtgggttgagtttgctgttggttctctactctgctccgagaggtttttctccgggtactccggttttcccctctccacaaaaaccaacacttctaaattccaattcgatctggaacgctcgaacgtttattacatcttcgggagaatgggcaaccactcttcacgttatcgagcttaaataattgatttgatttaatttgatttagatGTAGTTATTGTTCTAGATATTTTTCAGTTAGCTAGTGTTAAATAAAACACCACAATTTTGTCTTTACGCCTgcaaaagcgtttttattttcttatggtgaaaatttaatttttccttGTTTCACTGTTGAAAGTATTTCAACCTATTCTATAGCCATTTTACCGTCGTGTGTATGCTTAGTCGTGGGGTTActatggatgaaatcctaaaattgtgaccattcaaatgaaagctgctgcTGAGCAGTACTGTCCTTtgctgctgtttattatgttgtacaaagtGGTTcaaattttgagtctgtggatgaaatcctaaagtgtgaccattcaaatgaaagctgctgcTGAGCAGTACTGTCCTTtgctgctgtttattatgttgtacaaagtGGTTcaaattttgagtctgtggatgaaatcctaaagtgtgaccattcaaatgaaagctgctgagcagtactttcctgtggtgctgtttattatgctgtacaaggtggttctaacttttgagtctgtggatgaaatcctaaagtgtgaccattcaaatgaaagct

Protein

Uniprot

Uniprot term	Description
Q6PDC8	Major facilitator superfamily domain-containing protein 4A OS=Mus musculus OX=10090 GN=Mfsd4a PE=2 SV=2
Q5RCN7	Major facilitator superfamily domain-containing protein 4A OS=Pongo abelii OX=9601 GN=MFSD4A PE=2 SV=1
Q8N468	Major facilitator superfamily domain-containing protein 4A OS=Homo sapiens OX=9606 GN=MFSD4A PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23121	SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005355	Molecular Function	obsolete glucose transmembrane transporter activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08175	NAGLT1; MFS transporter, FHS family, Na+ dependent glucose transporter 1	-	Transporters	ko02000	deepkoala