Gene detail

Detailed information of pspe_0.1.m1.67732.m1 in Pachyseris speciosa

Genomic Location: Sc0001546:138361...139338
NR annotation: XP_044175109.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114965144 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O88277	Protocadherin Fat 2 OS=Rattus norvegicus OX=10116 GN=Fat2 PE=1 SV=1
Q5F226	Protocadherin Fat 2 OS=Mus musculus OX=10090 GN=Fat2 PE=1 SV=1
Q9NYQ8	Protocadherin Fat 2 OS=Homo sapiens OX=9606 GN=FAT2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00028	Cadherin	Cadherin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002126	Domain	Cadherin-like	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24026	FAT ATYPICAL CADHERIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan