Detailed information of pspe_0.1.m1.67884.m1 in Pachyseris speciosa

Genomic Location: Sc0001563:79137...84442
NR annotation: ABP97098.1, cryptochrome CRY1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R194Cryptochrome-2 OS=Mus musculus OX=10090 GN=Cry2 PE=1 SV=1
Q923I8Cryptochrome-2 OS=Rattus norvegicus OX=10116 GN=Cry2 PE=1 SV=1
Q5IZC5Cryptochrome-1 OS=Erithacus rubecula OX=37610 GN=CRY1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03441FAD_binding_7FAD binding domain of DNA photolyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005101DomainCryptochrome/DNA photolyase, FAD-binding domainInterproscan
IPR036134Homologous_superfamilyCryptochrome/DNA photolyase, FAD-binding domain-like superfamilyInterproscan
IPR002081FamilyCryptochrome/DNA photolyase class 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11455CRYPTOCHROMEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:0043153Biological Processentrainment of circadian clock by photoperiodInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan

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