Gene detail

Detailed information of pspe_0.1.m1.68191.m1 in Pachyseris speciosa

Genomic Location: Sc0001600:104778...113771
NR annotation: CAH3117564.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.68191.m1

ATGACAAGATCTGTGGAGAAGGAAAGTGAAGGGTGTGACACAGAGTTGCCAGAGGTTTTTGAAGTGGATAACAAGCCAACCAAAGCTAATGCCAAGAACGAATGTCATGTTGATGCCAACCATGGTAGGCTGATGGGCAGCTCTGCTGAACGTGAGACCATTAAAGTCCAGCAGGACAGGGAGTATAAAGAGTCCCTGGCAGCTGACCAagctaaagaaaaacaaaagctggaAATCGAGGAGACAACCAAGAGGCAACTGCAGTTGCAAACTGCACGTAAAAGAAGATTACCTCTTGAACCTGCAGTTAATGAAGCTAGTGCTGTTGTCTCGGTCCGTCATATTACTTTGGGTATTCAAAGACGGGCTTTTAAAGTAACTGATGAAATGGCTGCAGTATATGACTGGATTGGCTCTCTAAGAAACAGAGGGTATGCTCCCTATCCTGAAGATGGATTAAACTTTCTTGGATTTGGAAATGAGGAAGATTTGAGCAACCCCAACGTCACACTACCTGATTTGTGGTGTACTATGGATGATTTCAATTTCAACGAGACCTTACCAACAGCCTTAATGGAGGGGGACTTTCACTTAGAAAACAATCCAGAAATCAGCCATGTTACTGAGGACAGAATTCCAAGTGTGGTCAGCAATGGTGGTACTCAGGACAGCATCCCTAGTCTGGCTAACAATACTGCTACTCAGGACAGCATCCCTAGTCTGGTTAACAATACTGCTACTGAGGACAGCATCCCTAGTCTGCCAACAATACTGCTAGTGACGACAGCATCCCTAGTCTGGCTAACAATATTGCTACTCAGGACATTATATCCTAGTCTGGCTAACAATACTGCTACTCAGGACAGCAATCCAAACAGGACCACGAAAGGGGGTACAAGACACAGTCAGACAAACCGTGGCTTTCAGTTTCGGCAAATTTATTTGCCACAATTGTTGAGTGGTACATCTCAGACGGAAACCCGGAGAAAGCCATCGCTGCAAATGCCGGCCACCTTTCAGACGATGGAGTGGACAGAACAAAAAGATGTGATGCTAGCCCGAGAAATCCTTCTTTGTGAACCCTTTAAATATAGGGCTGGCTCAAAAGAACGTGGTTCGGTGTGGAGCCAAATAGCGACAAATCTGAATACTCATCCAGGGTTCACAGTGTCACAGAGAGCTGTTAGAGATCGTTTCGGCATCCTCGAGAAAAAAGCCAAGAAACGAAAacgtgaaattgaaaatggaacTGGCATCTCCCCTGAAGATTCAGAGCTTGATTTAGCCCTTGAAGAAATCATAGAAAAATGGGAAGCGGCTGATCAAGAGTTCCAGCTTGATAACCAAAGCAAGGCGAAAAAACTAGAAAAGGACAAAGAAACAGCAGAGGAGATGCGGAGAATGTCAATGGAAACTCTCGGTGCTTCTAAGAAGAGGAAATCCGATCCAGATGAGTCAGCGGAAGAGAAGCGGTGTAAAAAGCGGAGAGGTGGCAGCGACACAGTCCAGTTTCTAAAAGAGCATAGTGAGATGGAGTTTAGGTTTAAAAGAGAGGAGCTTGAGGCTAAGAAAACAACAACTACAGcaacagaaccaacaacaacaactacaacaacaacagatgCAGCAACAACTACAACAGATGCAAACTATGTTTATGGAATCCCAGAAGCAGCAAGCGCAGCTTATGGCCACcttatttcagaaaatATAACACGTCAAGTACTAAATGTGAGAGTCATTGATGACCATGGTCGTTTGGAGAAGGGAGAAGGCCCCGGCGTACTAAGAGATGTATTATCTACTTTTTGGCAGCACATATTTGCTTCCTTGACGTTGGGGCACGTTGAAAAGGTACCTTCCATCAGACATGATCATCAAAAACATGAATGGGAAGCGATTGGGCGTGTGTTGCTGTATGGTTTTAAAGAAGCAGGTTATGTGCCCGTTTGCCTATCACCAGTATTCCTGACATCCTGTCTACACGGCGAGGAGACAATTACAGAGGCAGAGCTTCTTCTGTCATTTAAATCATACATCACTCCTGACGAAAGAGAAGTGTTGGAAAGAGTTTTGTCGGAAGACTTTGAATCTGATGACGAAGATCTCATCGAGTTTCTGTCCAGTTACAAGTGCTATCGAAAACCTAAGCCCCAAAATATCAAGAGTCTATTCGGGGAGCTTGCGCACCAAGAAATCATTCAAAAGCCAAGGTACATCGCCAACTGCTGGGCCCCTGTGCTAGGAGTCCTGAAGGGACATCCCGACTTTGCTAACGTAGAGAGTCTGAGGCAATTGTTCTTAGATAACAAGCCAACTGCCAAGAAAGTTATCAAGGCTCTAGATGCCAAGCCAACTTCGGATGCAGAAAAAGAGTCGTTGGGCTTTCTAAAAAAGTTCATTAAATCTCTTGATGCAGAGTCTCTGAAGGTCTTTCTGAAGTTTGTAACTGGCTCTGACGTGATGGTACTGCAAACTATTTCCGTGTCATTCAACTCAGTGGAAGGTAAAGGGAGAACCCCCATCGCACACACATGTGGACCAACCCTGGAATTGCCCTCTACTTACCAGTCTTACAATGAGTTGGCTGAGGAATTCACAAATATCCTAAGAGAAAAGGAATCTTGGACTTTCAATATTGTTTAA

Transcript

pspe_0.1.m1.68191.m1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569	Domain	HECT domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33309	KERATIN, ULTRA HIGH-SULFUR MATRIX PROTEIN-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan