Detailed information of pspe_0.1.m1.68370.m1 in Pachyseris speciosa

Genomic Location: Sc0001622:24220...41339
NR annotation: CAH3178915.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TN88Polycystin-1-like protein 2 OS=Mus musculus OX=10090 GN=Pkd1l2 PE=2 SV=1
Q7Z442Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051223FamilyPolycystinInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR000434FamilyPolycystic kidney disease type 1 proteinInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04988PKD1L2; polycystin 1L2-Ion channelsko04040deepkoala

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