Gene detail

Detailed information of pspe_0.1.m1.68483.m1 in Pachyseris speciosa

Genomic Location: Sc0001637:88113...102459
NR annotation: XP_020604383.1, TOM1-like protein 2 [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q68FJ8	TOM1-like protein 2 OS=Xenopus laevis OX=8355 GN=tom1l2 PE=2 SV=1
O88746	Target of Myb1 membrane trafficking protein OS=Mus musculus OX=10090 GN=Tom1 PE=1 SV=1
O60784	Target of Myb1 membrane trafficking protein OS=Homo sapiens OX=9606 GN=TOM1 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Alpha-Helix\|GAT
Ubiquitin Family	UBD\|Alpha-Helix\|VHS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00790	VHS	VHS domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002014	Domain	VHS domain	Interproscan
IPR038425	Homologous_superfamily	GAT domain superfamily	Interproscan
IPR008942	Homologous_superfamily	ENTH/VHS	Interproscan
IPR004152	Domain	GAT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13856	VHS DOMAIN CONTAINING PROTEIN FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035091	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0005768	Cellular Component	endosome	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030276	Molecular Function	clathrin binding	Interproscan