Detailed information of pspe_0.1.m1.68607.m1 in Pachyseris speciosa

Genomic Location: Sc0001652:12758...88892
NR annotation: CAH3119165.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7Z5N4Protein sidekick-1 OS=Homo sapiens OX=9606 GN=SDK1 PE=1 SV=3
Q3UH53Protein sidekick-1 OS=Mus musculus OX=10090 GN=Sdk1 PE=1 SV=1
Q60ZN5Protein sidekick homolog OS=Caenorhabditis briggsae OX=6238 GN=rig-4 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007411Biological Processaxon guidanceInterproscan
GO:0030424Cellular ComponentaxonInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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