Detailed information of pspe_0.1.m1.68974.m1 in Pachyseris speciosa

Genomic Location: Sc0001705:54882...64817
NR annotation: CAH3029680.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2WAN4DNA mismatch repair protein MutS OS=Paramagnetospirillum magneticum (strain ATCC 700264 / AMB-1) OX=342108 GN=mutS PE=3 SV=2
A8GRI6DNA mismatch repair protein MutS OS=Rickettsia rickettsii (strain Sheila Smith) OX=392021 GN=mutS PE=3 SV=1
B0BWY8DNA mismatch repair protein MutS OS=Rickettsia rickettsii (strain Iowa) OX=452659 GN=mutS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00488MutS_VMutS domain VDomainInterproscan
PF05192MutS_IIIMutS domain IIIDomainInterproscan
PF05190MutS_IVMutS family domain IVDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000432DomainDNA mismatch repair protein MutS, C-terminalInterproscan
IPR036187Homologous_superfamilyDNA mismatch repair protein MutS, core domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011184FamilyDNA mismatch repair Msh2-typeInterproscan
IPR007696DomainDNA mismatch repair protein MutS, coreInterproscan
IPR045076FamilyDNA mismatch repair MutS familyInterproscan
IPR036678Homologous_superfamilyMutS, connector domain superfamilyInterproscan
IPR007861DomainDNA mismatch repair protein MutS, clampInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11361DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006298Biological Processmismatch repairInterproscan
GO:0030983Molecular Functionmismatched DNA bindingInterproscan
GO:0003690Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0043504Biological Processmitochondrial DNA repairInterproscan
GO:0140664Molecular FunctionATP-dependent DNA damage sensor activityInterproscan

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