Detailed information of pspe_0.1.m1.69668.m1 in Pachyseris speciosa

Genomic Location: Sc0001818:1235...5530
NR annotation: CAH3028822.1, unnamed protein product [Porites evermanni]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P22451Large ribosomal subunit protein uL18 OS=Gallus gallus OX=9031 GN=RPL5 PE=1 SV=2
P15125Large ribosomal subunit protein uL18A OS=Xenopus laevis OX=8355 GN=rpl5-a PE=2 SV=2
P15126Large ribosomal subunit protein uL18B OS=Xenopus laevis OX=8355 GN=rpl5-b PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005225 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17144
all species →		Ribosomal_L5eRibosomal large subunit proteins 60S L5, and 50S L18FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005485
all species →		FamilyLarge ribosomal subunit protein uL18 eukaryotic/archaealInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23410
all species →		RIBOSOMAL PROTEIN L5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0008097
all species →		Molecular Function5S rRNA bindingInterproscan
GO:0000027
all species →		Biological Processribosomal large subunit assemblyInterproscan
GO:0022625
all species →		Cellular Componentcytosolic large ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.69668.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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