Gene detail

Detailed information of pspe_0.1.m1.6982.m1 in Pachyseris speciosa

Genomic Location: Sc0000012:1967385...1971736
NR annotation: XP_033764274.1, uncharacterized protein LOC117345314 [Pecten maximus]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.6982.m1

ATGCGCACTTTCGTGGTTGGCAAAAAGCCGGCTTCGTTCTGTTTTCATGGCTTCCACGTGCGATTCCGAATAAAAAGTCTCGATCCTGTTGCAAGATCGCGATATCATTTTAAATTAAACTACAACAAAGGTGCAAGTAGCCTTCCCGACCCATATAATTTGAAAGGACGGACAAACAATCCCAGTTCTTGGCCAGATTTAACATTTGGGGATCTGTACACGTATTTAATCGACACGCCGGGTATTTACACGAGGGAGAGTCTAAAGGCCTTCAAGTCGCTTGAAGCGTATCAATTTGTCATCAGCGGCGATGTTAAACCATTATGGTATCATTCAGTTGGAGACAATATCCCTTACTACTTCATTAAAGGGAAAGTAATTCCGTCCCAGAGAATTAACGATCAGCCGCACGATGCGTGGGTTTGCCTTCGTAAAAAGGACGCCAGTGTCCACGCAGCACATTGCACATGTATGGCCGGGCTTGGAGAAGTTTGCAGTCATGTCGCCGCTATCCTGTTTAAAATAGAAGTTGCTGTGAAGCTAGGTCTTACCAAGACTTCCAGCACTAGTGAAGCATGcaagtggaacaaaacgttcagAGAAAAGATTAATCCCAGATCAGTTGCTGAGTTTACCGACCTTGTTAAGAGGAATAGGAAAGGAGATGTACCTTCAGTGTCTTACGCCCCATCACCACCCCTCCCTAAGCTGTCCGTGTTAAAAAGCCTAAAGGAAGTATGTCCAAGAGCAGCTTTTTTCAGTTTAATCCCCAAACTTGACCCAGAGGAGACCGACAGTGCATCAGAAGATCAAGATGAGAGTAACCTGCCTCAGCCATTGACAGCTCTTTACTCAGAAGAATACGCTTCACTTACCAAACTTCAGCTAAAGGAAAAATGCAGCCAGCTTGCTAAAGAGTTGCAAGTCACTCCAGAGCAATGCAAAGAATTGGAGAAGGTTACCAGGAATCAGTCTATCTGCCCCCTATGGTTTGAGCACCGGAAAGGAAGAATCACAGCAAGCAAAGCACACAGTGTACTAAAGAGGAAAGAGAGTACACCTCCTGAGAACTTACTGAATTCAATTATGGGCTACAATGCCTATGACCTTTGTAAAATTAAGCAGATTCTATGGGGTATTGATAATGAGGAGAAGGCCCGACTGAGATAcatagaagaaaaaaagctaACTCATGAGAATTTTGAATGCAGGTTGTCTGGCTTTGTTATGGATCTTGACAGGCCATATATAGGAGCATCAGCTGATGGGATTGCTACTTGCAAATGCTGCCCCCTAAGAGTTGTTGAAATAAAATGCCCTTTTAAACATAAAGATGTACTACCAATGGAAGCAGCTAAAAGTGATCCTGATTTTTGTGTAGATGACAAAGGTCATTTGAAAGAGACACATGCATACTACACCCAATTACAACTACAAGTACATGTGAATAGGATGGAAGTGGGAGACTTTTGTGTCTTCACCAACAAAGATTTGCACATTGTGGAGGGAATCCCTTTAAACAAAAGTTTTATAGAACACTCCCTTACCAAACTGGacattttatttgaaaatgtaATACTTCCAGAGATCCTTACAAGGAAGTTGGAAATTTCAGAGATGGGAGATGAAAACAGTGGGCAAGATGAGGAGCAGTTGTACTGCATCTCTAGCCAGCCAGAATATGGAAAAATGATCGCTTGTGACAAACCTACCTGTGATATTGTGTGGTTTCACTATGCCTGCGTCAGCATTCGTAGGAAACCAAAAGGAAAATTTCCTGAAAGTGAACCAAAGCGGAACGCTTGGATCAATGCAGTTCATAGGAAGCATTGGAAGCCGTCTGAGTCCTCGCGACTCTGCAGTGTTCACTTCTTATCAGGGAGGACTAGCGATGAAGCAAATGATCCAGATTATATTCCAAACTTGGCCATGGGCTATGGTGACGATAGCTTGGCTCTTCAATTATTCTTGAAGAAAAAAGCGCAGAACGAACGCAGACTTCGTAGGTCCCAAGCTAAGGATGACAAAAATATAAAACTATCCAGTGAAGAAGAAACCGGAGATCTGAGGTCAAAAGTGGATGATATGAACTTCAGTCTTGATCAAGATACAAAAGCTGGCGAAGGTAAAGACGAATAG

Transcript

pspe_0.1.m1.6982.m1

Protein

Uniprot

Uniprot term	Description
Q8WYH8	Inhibitor of growth protein 5 OS=Homo sapiens OX=9606 GN=ING5 PE=1 SV=1
Q9D8Y8	Inhibitor of growth protein 5 OS=Mus musculus OX=10090 GN=Ing5 PE=1 SV=1
Q9VJY8	Inhibitor of growth protein 5 OS=Drosophila melanogaster OX=7227 GN=Ing5 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09588	YqaJ	YqaJ-like viral recombinase domain	Domain	Interproscan
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019080	Domain	YqaJ viral recombinase	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47526	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan