Detailed information of pspe_0.1.m1.69995.m1 in Pachyseris speciosa

Genomic Location: Sc0001873:27812...51553
NR annotation: CAH3014726.1, unnamed protein product [Porites evermanni]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q761X5Netrin receptor UNC5C OS=Rattus norvegicus OX=10116 GN=Unc5c PE=1 SV=1
Q7T2Z5Netrin receptor UNC5C OS=Gallus gallus OX=9031 GN=UNC5C PE=2 SV=1
O08747Netrin receptor UNC5C OS=Mus musculus OX=10090 GN=Unc5c PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004837 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679
all species →
I-setImmunoglobulin I-set domainDomainInterproscan
PF17217
all species →
UPAUPA domainDomainInterproscan
PF00531
all species →
DeathDeath domainDomainInterproscan
PF00090
all species →
TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00791
all species →
ZU5ZU5 domainFamilyInterproscan
PF13837
all species →
Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR013098
all species →
DomainImmunoglobulin I-setInterproscan
IPR036383
all species →
Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000488
all species →
DomainDeath domainInterproscan
IPR033772
all species →
DomainUPA domainInterproscan
IPR003599
all species →
DomainImmunoglobulin subtypeInterproscan
IPR011029
all species →
Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR003410
all species →
DomainHYR domainInterproscan
IPR036179
all species →
Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR000884
all species →
RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR000906
all species →
DomainZU5 domainInterproscan
IPR037936
all species →
FamilyNetrin receptor UNC5Interproscan
IPR044822
all species →
DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR007110
all species →
DomainImmunoglobulin-like domainInterproscan
IPR003598
all species →
DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12582
all species →
NETRIN RECEPTOR UNC5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0007165
all species →
Biological Processsignal transductionInterproscan
GO:0005042
all species →
Molecular Functionnetrin receptor activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0038007
all species →
Biological Processnetrin-activated signaling pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.69995.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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