Gene detail

Detailed information of pspe_0.1.m1.70099.m1 in Pachyseris speciosa

Genomic Location: Sc0001894:5428...6789
NR annotation: XP_015780003.1, PREDICTED: volume-regulated anion channel subunit LRRC8A-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P55866	Caspase-3 OS=Xenopus laevis OX=8355 GN=casp3 PE=2 SV=1
P45436	Cell death protein 3 OS=Caenorhabditis remanei OX=31234 GN=ced-3 PE=3 SV=2
P42573	Cell death protein 3 OS=Caenorhabditis elegans OX=6239 GN=ced-3 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13855	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF00656	Peptidase_C14	Caspase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015917	Domain	Peptidase C14A, caspase catalytic domain	Interproscan
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR016129	Active_site	Peptidase family C14A, His active site	Interproscan
IPR029030	Homologous_superfamily	Caspase-like domain superfamily	Interproscan
IPR001309	Domain	Peptidase C14, p20 domain	Interproscan
IPR002138	Domain	Peptidase C14, caspase non-catalytic subunit p10	Interproscan
IPR011600	Domain	Peptidase C14, caspase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47901	CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004197	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan