Gene detail

Detailed information of pspe_0.1.m1.70175.m1 in Pachyseris speciosa

Genomic Location: Sc0001907:33572...37018
NR annotation: XP_022784026.1, uncharacterized protein LOC111324681 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.70175.m1

tgactgctcttaacgatcatttttaaccctttattgtcttttctacgggcatttatgtcaaaataaataccgatttttctaggttaatcagtacaagctattcgCGTCTATCACACGGCGGCCATCTTAGCATGAAATCGAGGCTGTGCGTGCTAATTGTTTACATTGTTGCCGTCGCAACATTGTCGACGCAACATGCCGAACAAAGAGAGATGTTGCATGCCGTTGTGCTCCAATAAAAGGACGAAAAGAGGAGATGCGATTACTTTCCATCGTTTTCCGAAAAGCCAACAACTTAAGAAAGACTGGATCATTAAGATTCGTCAAGATGTCGGCAAATACTTAAAAATCACCAACAGCACGAAGGTGTGCTCGCAACATTTTCTTAAATCGGACTTCAGAAGGACATTGAGTGGTCAAAAAGCATTGTTAAAACGAAAAGCAGTGCCCTCCATATTTGAATGGATGAAACCATCGTCAAAAAGAAGAATACTTCAGCAAAGGTCAATAACTTTATCTGAGACTAATGAGAAAGCAACAGCATCTGCCAACAACAATGTACCTCAATCACATCACTGCACCCAAGTACAGGAGTCTACTGCTGTCTATACTCCAACTGTTAATGACCACGACTACGTTGCCTCGGGGAATCATACCACCACAGAGGATATGCTTCAAGCGGCTCAAGAAAGGATAGCAGCATTGGAAGCTTTGCAAGAAAAAGAGGTTTTATTTGTACAGTTACAAATGAAATCTGATGCAGCTATTAAATTCTAAACAGGATTTCCATCGTTTAAGATCCTTGCAGCTACTTTCAATGCTCTTAAACCAACAGCTGAGAAAATGTACTCCTGGTCGCAGTTTCAAAGGCTCCAAAATAAGGGAGCAGTGGAAGTAGGAACTTTAAGAGACACATTGAGAACATGCAAACTTAGTTTATTTCACCAGTTTTACTTATTGCTAAACAAGCTACGATTGGGTACCTTTGACCAGGTGTTAGCTGATACCTTTAATGTATCTGTTGCAACAGTCAGCAGAATAATTATTTCTTAGGTAAATTTTTTGTACTTTGTTTTAGGTAGTATGCCTATTTGGCCATCTCGGGCTCAAATCCAAAAGTACATGCCTGACTGTTTCAGGCAATTTTTTCCCAGGTGTAGGCCGAGGTATTATTGATGCATCTGAAATTAAGGTTCAGGCACCCTCAAGCATGGTGCTTAACAGTGAATTATACTCGGCCTATAAAAGCCACACTACCTACAAAGGTAACGTTGTCATTTCACCTTCAGGAGAAATAATTCACATAAGTGCCCTTTTTGGAGGGTCAATATCTGATAAAGAGCTTGTGAGGCAGTCTGGTCTTTTACCATTGCTTGAACCTGGGGACCAGCTGCTAGCTGATAAAGGATTTGTCATCCAGGATATGTTATCTTCCATTGGATGTGAGGTTGTAATGCCTGCATTTCTTTCAAGTAAAGGGCAGTTCTCAAAGAAGGAGTTGATGAGAAGTAAACAACTACACAATGTACGTGTGCATGTTGAGAAAGCTATTAGAAGGGTGAAGGAATTCCATTTCTTTGATCGTGTCCTTCCATTAACTGTAGCAGGAAGTATTAATGAAATATGGTCTGTAGCTTGCCTGTTGACAAATTTTCAAGGGCCCTTATTTTATTAGCCTGGCAAAATGGACTCACAAAttttcacaagtttgaaaatgcTGGTTTGTGTACACAAACTTGGGTTCGTTGGTGAGATGAGCTTGCAAACAGATAGAATTGCAGAAAAACATTTGAAGTGAAGGGTGTTCTGCGAAAGGGAGGTGACGtgtatcgcttttttgccttaaaatccaaaatatccctaaactcactctactttgacATATAGACtgaaaatggtgtcagaaatgaagttctgcacatATTTTGttattagaaagctaggatctgaaGAATTAGGTCGTGAAAAAACTCAGttagaaacaaaaacaaaaggatctgatgcatggttgatttcttttgttttgagttggttcagttttaggaaGAAGTTGTTGCTGAATCCAAGCCTGTCAATCACAAAATGAGTGCAGATTTTCATTTCTTACACCATAGCCAGTCTGTATGGCAAGgtagagcaaatttagagagatttggattttaaggcaaaaaagtgatatacaacccttttgcagaatacccttcaTTCAGTTTCAGCATTGTGCTCCTGCCCAATCTAAGTTTCTAACTTGTGATGACTTACTAGTCCATCTGGCCAGGTCTTGTGTATACAGATAAATTATAGTTTTAGCTTTTATAAGGCTGATTTCAGTACTCTGTGTATGAAGACAGCCACTTATTTGAATCAGTAGTTTTGCATGCCTGGTCGGTTGGGTAATTGTCATAGATTGTAGCTAACTAAAATATTTTGGCTTGGTCAAAGGCCTGTGTGATTTTGAACTTCTTTTAAACAACCAAAACTACAATAATATTGATTTGGTATAATTACAGGAAATGAGATTGCCTATCAGAATTGGTTCCCCTAATGTATaggtaattaaataaatttcaaccacatcacaaaataattaatatttacatgtatctACATAATGAGCACCCCTATATCTTTTATGTAGAAATCTCCTCCAAAAGGGGATTGGGTGACTCTTCATGGGGGTAATTTTCTGAGTGAGTGTTAAACAAACTCAATACAGTGATACTTTTATATTTATCATTCCTTAGGAGGTTTGTAAATATTAATCAATGTCAACAAACAAACGGTTATTGTACTGAAGCGGGTAGGTGAAAGTTAAAGTAAAATAAGTTCACCTTTTCAAGCATTTCAGTAAAGAGATCATTGTCAAAGTAAATTCTTTCACAATGAAATTCTTAgcaacaataaacaaaaaagtcaATCCATGTGCAACCTGTTAGGCCAAGGATGCCCATGACCTGGT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052224	Family	THAP domain-containing protein	Interproscan
IPR006612	Domain	THAP-type zinc finger	Interproscan
IPR038441	Homologous_superfamily	THAP-type zinc finger superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46927	AGAP005574-PA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23204	THAP2; THAP domain-containing protein 2	-	Chromosome and associated proteins	ko03036	deepkoala