Detailed information of pspe_0.1.m1.70606.m1 in Pachyseris speciosa

Genomic Location: Sc0001996:53884...57966
NR annotation: CAH3183826.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9FGH2Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 OS=Arabidopsis thaliana OX=3702 GN=LSH5 PE=1 SV=1
Q9LMK2Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1
Q9SN52Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04852ALOG_domALOG domainDomainInterproscan
PF00589Phage_integrasePhage integrase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006936DomainALOG domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR002104DomainIntegrase, catalytic domainInterproscan
IPR040222FamilyALOG familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31165PROTEIN G1-LIKE2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009299Biological ProcessmRNA transcriptionInterproscan

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