Detailed information of pspe_0.1.m1.70814.m1 in Pachyseris speciosa

Genomic Location: Sc0002046:2316...68100
NR annotation: CAH3144384.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q70E20Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sned1 PE=2 SV=2
Q9UGT4Sushi domain-containing protein 2 OS=Homo sapiens OX=9606 GN=SUSD2 PE=1 SV=1
Q5ZQU0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Sned1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06119NIDONidogen-likeFamilyInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF03782AMOPAMOP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR005533DomainAMOP domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR003886DomainNIDO domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051495FamilyEpithelial Barrier and Cell Signaling ProteinInterproscan
IPR002909DomainIPT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13802MUCIN 4-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan

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