Detailed information of pspe_0.1.m1.70843.m1 in Pachyseris speciosa

Genomic Location: Sc0002052:607...11031
NR annotation: XP_020625171.1, myotubularin-related protein 13-like isoform X1 [Orbicella faveolata]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q86WG5Myotubularin-related protein 13 OS=Homo sapiens OX=9606 GN=SBF2 PE=1 SV=1
E9PXF8Myotubularin-related protein 13 OS=Mus musculus OX=10090 GN=Sbf2 PE=1 SV=1
Q6NTN5Myotubularin-related protein 13 OS=Xenopus laevis OX=8355 GN=sbf2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002855 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02141
all species →		DENNDENN (AEX-3) domainFamilyInterproscan
PF12335
all species →		SBF2Myotubularin protein FamilyInterproscan
PF03456
all species →		uDENNuDENN domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001194
all species →		DomaincDENN domainInterproscan
IPR037516
all species →		DomainTripartite DENN domainInterproscan
IPR022096
all species →		DomainSBF1/SBF2 domainInterproscan
IPR005113
all species →		DomainuDENN domainInterproscan
IPR043153
all species →		Homologous_superfamilyDENN domain, C-terminal lobeInterproscan
IPR051696
all species →		FamilyDENN Domain-Containing GEFsInterproscan
IPR005112
all species →		DomaindDENN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12296
all species →		DENN DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0031410
all species →		Cellular Componentcytoplasmic vesicleInterproscan
GO:0032483
all species →		Biological Processregulation of Rab protein signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.70843.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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