Genomic Location: Sc0002149:56552...57847
NR annotation: XP_020604575.1, FRAS1-related extracellular matrix protein 2-like [Orbicella faveolata]
| CDS | ||||
| pspe_0.1.m1.71225.m1 | ||||
| Transcript |
| pspe_0.1.m1.71225.m1 |
| Protein |
| pspe_0.1.m1.71225.m1 |
| Uniprot term | Description |
|---|---|
| Q9GV77 | Extracellular matrix protein 3 OS=Lytechinus variegatus OX=7654 GN=ECM3 PE=1 SV=1 |
| P0C091 | FRAS1-related extracellular matrix protein 3 OS=Homo sapiens OX=9606 GN=FREM3 PE=1 SV=2 |
| Q6NVD0 | FRAS1-related extracellular matrix protein 2 OS=Mus musculus OX=10090 GN=Frem2 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16184 | Cadherin_3 | Cadherin-like | Domain | Interproscan |
| PF19309 | Frem_N | Frem protein N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051561 | Family | FRAS1-related extracellular matrix | Interproscan |
| IPR039005 | Repeat | CSPG repeat | Interproscan |
| IPR045658 | Domain | FRAS1-related extracellular matrix protein, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45739 | MATRIX PROTEIN, PUTATIVE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0009653 | Biological Process | anatomical structure morphogenesis | Interproscan |
| GO:0062023 | Cellular Component | collagen-containing extracellular matrix | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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