Detailed information of pspe_0.1.m1.7123.m1 in Pachyseris speciosa

Genomic Location: Sc0000013:1255271...1315287
NR annotation: CAH3018055.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E1C1R4Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus OX=9031 GN=USP47 PE=3 SV=1
Q96K76Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens OX=9606 GN=USP47 PE=1 SV=3
Q8BY87Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyULD|UFD/UBQ|UBQ_Other
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF19718USP47_CUbiquitin carboxyl-terminal hydrolase 47 C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR045578DomainUbiquitin carboxyl-terminal hydrolase 47, C-terminalInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11857USP47; ubiquitin carboxyl-terminal hydrolase 47EC:3.4.19.12
Ubiquitin systemko04121deepkoala

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