Detailed information of pspe_0.1.m1.7584.m1 in Pachyseris speciosa

Genomic Location: Sc0000016:576528...591270
NR annotation: XP_027044105.1, cartilage matrix protein-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21941Matrilin-1 OS=Homo sapiens OX=9606 GN=MATN1 PE=1 SV=1
E1BMV3Matrilin-1 OS=Bos taurus OX=9913 GN=MATN1 PE=1 SV=4
P05099Matrilin-1 OS=Gallus gallus OX=9031 GN=MATN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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