Detailed information of pspe_0.1.m1.7595.m1 in Pachyseris speciosa

Genomic Location: Sc0000016:734534...743107
NR annotation: XP_020622869.1, E3 ubiquitin-protein ligase parkin-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E0VIU9E3 ubiquitin-protein ligase parkin OS=Pediculus humanus subsp. corporis OX=121224 GN=park PE=1 SV=1
Q9WVS6E3 ubiquitin-protein ligase parkin OS=Mus musculus OX=10090 GN=Prkn PE=1 SV=1
Q9JK66E3 ubiquitin-protein ligase parkin OS=Rattus norvegicus OX=10116 GN=Prkn PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17978zf-RING_14RING/Ubox like zinc-binding domainDomainInterproscan
PF17976zf-RING_12RING/Ubox like zinc-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003977FamilyE3 ubiquitin-protein ligase parkinInterproscan
IPR041170DomainRING/Ubox-like zinc-binding domainInterproscan
IPR047535DomainE3 ubiquitin-protein ligase parkin, RING finger, HC subclassInterproscan
IPR041565DomainParkin, RING/Ubox like zinc-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
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 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

TOP