Gene detail

Detailed information of pspe_0.1.m1.7640.m1 in Pachyseris speciosa

Genomic Location: Sc0000016:1480173...1480881
NR annotation: PFX13527.1, Pogo transposable element with KRAB domain [Stylophora pistillata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4W5G0	Tigger transposable element-derived protein 2 OS=Homo sapiens OX=9606 GN=TIGD2 PE=1 SV=1
Q0VBL1	Tigger transposable element-derived protein 2 OS=Mus musculus OX=10090 GN=Tigd2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF09607	BrkDBD	Brinker DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR050863	Family	Centromere and Transposable Element-Derived Protein	Interproscan
IPR018586	Domain	Brinker DNA-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19303	TRANSPOSON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07483	K07483; transposase	-	Replication and repair	-	deepkoala