Detailed information of pspe_0.1.m1.7710.m1 in Pachyseris speciosa

Genomic Location: Sc0000016:2137379...2151810
NR annotation: CAH3168491.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D4G9RecQ-mediated genome instability protein 1 OS=Mus musculus OX=10090 GN=Rmi1 PE=2 SV=1
Q5ZHV8RecQ-mediated genome instability protein 1 OS=Gallus gallus OX=9031 GN=RMI1 PE=2 SV=1
A4IF98RecQ-mediated genome instability protein 1 OS=Bos taurus OX=9913 GN=RMI1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21000RMI1_N_NRMI1, N-terminal helical domainDomainInterproscan
PF08585RMI1_N_CRMI1, N-terminal OB-fold domainDomainInterproscan
PF16099RMI1_CRecq-mediated genome instability protein 1, C-terminal OB-foldFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR049363DomainRMI1, N-terminal domainInterproscan
IPR013894DomainRecQ mediated genome instability protein 1, OB-fold domainInterproscan
IPR044881Homologous_superfamilyRecQ-mediated genome instability protein 1, N-terminal helical domain superfamilyInterproscan
IPR032199DomainRecQ-mediated genome instability protein 1, C-terminal OB-fold domainInterproscan
IPR042470Homologous_superfamilyRecQ mediated genome instability protein, N-terminal OB-fold domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14790RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0016604Cellular Componentnuclear bodyInterproscan
GO:0031422Cellular ComponentRecQ family helicase-topoisomerase III complexInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10990RMI1, BRAP75; RecQ-mediated genome instability protein 1-DNA repair and recombination proteinsko03400deepkoala

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