Detailed information of pspe_0.1.m1.7714.m1 in Pachyseris speciosa

Genomic Location: Sc0000016:2192282...2193867
NR annotation: EDO32561.1, predicted protein, partial [Nematostella vectensis]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8IYB3Serine/arginine repetitive matrix protein 1 OS=Homo sapiens OX=9606 GN=SRRM1 PE=1 SV=2
Q5R5Q2Serine/arginine repetitive matrix protein 1 OS=Pongo abelii OX=9601 GN=SRRM1 PE=2 SV=1
Q52KI8Serine/arginine repetitive matrix protein 1 OS=Mus musculus OX=10090 GN=Srrm1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001370 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01480
all species →		PWIPWI domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036483
all species →		Homologous_superfamilyPWI domain superfamilyInterproscan
IPR002483
all species →		DomainPWI domainInterproscan
IPR052225
all species →		FamilySerine/arginine repetitive matrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23148
all species →		SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005681
all species →		Cellular Componentspliceosomal complexInterproscan
GO:0048024
all species →		Biological Processregulation of mRNA splicing, via spliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.7714.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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