Gene detail

Detailed information of pspe_0.1.m1.9749.m1 in Pachyseris speciosa

Genomic Location: Sc0000024:1669358...1679738
NR annotation: CAH3166178.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.9749.m1

ATGGAAGGCAGTTCGGAGGAACTATCAACTGGCAGGAGCCCTGGAGCTGAGGATGTTATAGACACTTTTACTTTTAGTTCACTTCCTCTTGAAGAGGTAATGCTGGGAGAATCTCGATATTCACAAAGTTCGCCATTGACAGCAGAGGCGAGCACCAAGGATAAGTCACCAGGGAAGGACAAGGCCACTTTTTCGAACATCGTTACCAGTGAGGGAGGTGTAGTGCTTGGCGAGGATGTAACATTGGTGTGTCCTCAAGGAGCTGTGGACAATCCAGTGACTGTAGAGATAACGTTAGAAAGCCCATCAAGGTACTATGGTCTAATAGTTCAAAGAGATCTTGAAAACGACGTCATGTTTGGGTCTCCCATCATTAACCTTCATCCTCATGGTCAACTCTTCAAGAAGCCTGTCACACTGAGATCCAAGCTCAAAGTCAAGAATTTCCACCCCGACGACGTCCTCATTTTGCATGGCACGGTAGCGCGGGACGGAAAGATCACCTGGCAGGACATCACTCGCAACTCAGAGATTGATGAGACGAATGCAGACGTGATCATTGAAGTTGGGCATTTTTCCCTCATAGCAGCCCTAATCAAATGGCCGAAAAAGACCTTGATGTTCACCAAAGACATTGTATACAGGTTAAACGTGCTGCCATTTCATTACAACATGTCAGTCCTGGTAAACAAGAACTCACTGCAAGAAGAGCTTGCACTGTTGTTCGTGAGCCAAGACGTTTACAACGAGCAGTTCTACCAAAATCATGATGAGACCTCTGCGTTGGTACAACTCAAAGCGAAAGGGTTTACAGAGCTGCATGTACGTTCTCTACATGGAGAAGGAGAAACACGCGTTTACAACAGTGAAAGCCTTAAGGTTTCTTTTCACCTTGGCAAAGACTACAAGATGGCTGACAGCAAACAAGGAGTTTTTGATTGTACGGTACATTCCAGCGTTTGGTGGAACACTGGAGAGGTCTTCAGACGTCCTCTGGAATGGACTGAAGACGCCAGAATGCTGTGCGGGACTATCTTTGTGGAAGGAGGGTATGGACATCGCAGTGCGAGAAAGTTCTGCGAAATGGACCTGATTGGTCATGTAAGGAACTTGCTGGGTGTAAAGGAAGCTATTTTTAACCTGATGCCCATTGCTCGCTTGCTTACGACACCTGAAGAGCTAACGAATCAAGTGCTGAAGTCCTGGAAGGAAGAGGACGAGCAACTCGAAATAATCTTGCAACACTGGTTAAAGGAGAACGAAGTAGTAAAAGATCTTGATACACTCAGGAAGCACCTTGAGGGCTTAAGACAAGAGGGTTACAAAGTAACGCaaagaggacagatgcacatcAGGCACTTCAGGGAGTTAGCAACAAAGATCTCGGGTTTGCAATTCCAAAATGCGGACTCGATGGAGTATTTCTGCGGTCAAATTCAAGCTCTCTGCAAGGCAGTTCTGAGGGACTGCTGCATGGAGTTGGAAGATTCTGCGGAAGGGATCCAAAGAGCAGCTTTGTCCACAAGTCATGTAGATTATCTCGAGAACCACACAGAAATATCCAAAGAGATGGCACGGAAATACCGACAGTTATGTTCATCTTCTGAAGAATCCACCAGTAAAGTTTACCTATCTATTGTATCTTATCTCATTCAAAAAGTCAAGGAAATCTTTGTGCAACAGAGTATTGCAGAAGTGCAAAATGGCTTAAGAGGGATCTGCGAGGAAAGACTTGAACAGTTTCTATCAAAAGTGCGACATGCTGAACAAAACATAATGATAAGGCAACTTGTCTGCATTGTTTGCGAAATTCTGGAGCAGTTGTGCCACGAAAACTGTGACAAGCAGTCTCCTGCAGAGCTCGAAGCGTGGGGTGAAACCCTGGCAATTTTTTCCATGTTGAACTATCTAAAACCCTTTTTTCAGTATAGCCCCCAAGACATTAGGCTGCACAAGAGATTAGAGCTGTTCTCGCGCCACCTAAAGTACATCATGTCCGTGGACGTCGCCGATGAGGTGTTCATGCGTGATTTTTCTGACGTGTCATTGAGTCTGATTCAATTTGCCAAGTTTTGTCCATCAAAACTGGTGCGATTTGAGCTCACCGACTCAACACGTTCGCCCGTGTCCTGCGTCGGGGAGAAGAATAACAACGAGAGCGTACAGTACGACAGACACCACGAGATATTCTTTCAGTGGTTTGAGATTAGGAAGGAATCAGAGGATGTGCTCCAACTTCATGCAAGTGCACTTGTGCACTTAAATGGACGAATTTGCAAGAAGGGAGCATTCCAATCAGTCATGATTCTTAAAGCATCTGCCGAAGAAGCCTTTGATGAGCGCATTATTCCTTTCACTGACGTTGCAGCAGAAAAGGCGAAAGACAAAGATTCGGGCAATCTTCGAGTGGTGCTTTGTTCCACGCAAAAAGAGAAAGTACGAGAAGTACTAAACGTCCTCAAACACACGATGAGAGAAGATGTCATAGATTTTAGGCCGTCCGAAGTCACTCAGTGTCACCTGACGATGCGATCTGTTACTTCAGGGGCAAACAAGGTTGTTAGGCTTCGCCTGTTTCACAAATGGAGGTCTGGGGCAATTGGTCTTGACAGCAAGGattttgtctgttttgctgATTCATCCGGTGATGGGACTCCCATACCTGAAGCAGAATTTTTGGATTTTGGAGATCAACTGATACCTGGGGACGTAGCTCCCTCGCTGGTGAGAAAAGCTGCAGACTTGGGTTTAGAGGACCAAGCAACACCAGACGACGGACCTCTTTCGCTGGTGAGTCCTACTGCAAACTCCACAGGTACATTGGATCGGTATCAGATACACAAGCTGATGCAGTATGGAAAAACTGAGTATCACTTGCACCAGCACGTCACCCATATGCAAGGCCAGGTTTGTGTCGTAGGGGACAGAACTAACGCTACGCTGAACGATCAGTCGCCCAGTCAGTGCGCTCTTCCGGGAGGACCTAGTTCTGCTCCTCACAGAAGCATAACCGATGGAAAGAGATCACAAGAATCACTGCCGACACCCCGCGACGATTGGACATAA

Transcript

pspe_0.1.m1.9749.m1

ATAGtagctgtagtgactggtgacGTTTAAACATTTTAGAGACTGAGAAGCTACCTTGTGTCACAACTGGTCAAAGAGACAATTCCAGTGCCGCTAAAGACAACAGTGGAAGCAGAACTGGCTTTGACGAGTCTGAAAAACAACTTCAAGAGCGCGAAGATAACATGGAAGGCAGTTCGGAGGAACTATCAACTGGCAGGAGCCCTGGAGCTGAGGATGTTATAGACACTTTTACTTTTAGTTCACTTCCTCTTGAAGAGGTAATGCTGGGAGAATCTCGATATTCACAAAGTTCGCCATTGACAGCAGAGGCGAGCACCAAGGATAAGTCACCAGGGAAGGACAAGGCCACTTTTTCGAACATCGTTACCAGTGAGGGAGGTGTAGTGCTTGGCGAGGATGTAACATTGGTGTGTCCTCAAGGAGCTGTGGACAATCCAGTGACTGTAGAGATAACGTTAGAAAGCCCATCAAGGTACTATGGTCTAATAGTTCAAAGAGATCTTGAAAACGACGTCATGTTTGGGTCTCCCATCATTAACCTTCATCCTCATGGTCAACTCTTCAAGAAGCCTGTCACACTGAGATCCAAGCTCAAAGTCAAGAATTTCCACCCCGACGACGTCCTCATTTTGCATGGCACGGTAGCGCGGGACGGAAAGATCACCTGGCAGGACATCACTCGCAACTCAGAGATTGATGAGACGAATGCAGACGTGATCATTGAAGTTGGGCATTTTTCCCTCATAGCAGCCCTAATCAAATGGCCGAAAAAGACCTTGATGTTCACCAAAGACATTGTATACAGGTTAAACGTGCTGCCATTTCATTACAACATGTCAGTCCTGGTAAACAAGAACTCACTGCAAGAAGAGCTTGCACTGTTGTTCGTGAGCCAAGACGTTTACAACGAGCAGTTCTACCAAAATCATGATGAGACCTCTGCGTTGGTACAACTCAAAGCGAAAGGGTTTACAGAGCTGCATGTACGTTCTCTACATGGAGAAGGAGAAACACGCGTTTACAACAGTGAAAGCCTTAAGGTTTCTTTTCACCTTGGCAAAGACTACAAGATGGCTGACAGCAAACAAGGAGTTTTTGATTGTACGGTACATTCCAGCGTTTGGTGGAACACTGGAGAGGTCTTCAGACGTCCTCTGGAATGGACTGAAGACGCCAGAATGCTGTGCGGGACTATCTTTGTGGAAGGAGGGTATGGACATCGCAGTGCGAGAAAGTTCTGCGAAATGGACCTGATTGGTCATGTAAGGAACTTGCTGGGTGTAAAGGAAGCTATTTTTAACCTGATGCCCATTGCTCGCTTGCTTACGACACCTGAAGAGCTAACGAATCAAGTGCTGAAGTCCTGGAAGGAAGAGGACGAGCAACTCGAAATAATCTTGCAACACTGGTTAAAGGAGAACGAAGTAGTAAAAGATCTTGATACACTCAGGAAGCACCTTGAGGGCTTAAGACAAGAGGGTTACAAAGTAACGCaaagaggacagatgcacatcAGGCACTTCAGGGAGTTAGCAACAAAGATCTCGGGTTTGCAATTCCAAAATGCGGACTCGATGGAGTATTTCTGCGGTCAAATTCAAGCTCTCTGCAAGGCAGTTCTGAGGGACTGCTGCATGGAGTTGGAAGATTCTGCGGAAGGGATCCAAAGAGCAGCTTTGTCCACAAGTCATGTAGATTATCTCGAGAACCACACAGAAATATCCAAAGAGATGGCACGGAAATACCGACAGTTATGTTCATCTTCTGAAGAATCCACCAGTAAAGTTTACCTATCTATTGTATCTTATCTCATTCAAAAAGTCAAGGAAATCTTTGTGCAACAGAGTATTGCAGAAGTGCAAAATGGCTTAAGAGGGATCTGCGAGGAAAGACTTGAACAGTTTCTATCAAAAGTGCGACATGCTGAACAAAACATAATGATAAGGCAACTTGTCTGCATTGTTTGCGAAATTCTGGAGCAGTTGTGCCACGAAAACTGTGACAAGCAGTCTCCTGCAGAGCTCGAAGCGTGGGGTGAAACCCTGGCAATTTTTTCCATGTTGAACTATCTAAAACCCTTTTTTCAGTATAGCCCCCAAGACATTAGGCTGCACAAGAGATTAGAGCTGTTCTCGCGCCACCTAAAGTACATCATGTCCGTGGACGTCGCCGATGAGGTGTTCATGCGTGATTTTTCTGACGTGTCATTGAGTCTGATTCAATTTGCCAAGTTTTGTCCATCAAAACTGGTGCGATTTGAGCTCACCGACTCAACACGTTCGCCCGTGTCCTGCGTCGGGGAGAAGAATAACAACGAGAGCGTACAGTACGACAGACACCACGAGATATTCTTTCAGTGGTTTGAGATTAGGAAGGAATCAGAGGATGTGCTCCAACTTCATGCAAGTGCACTTGTGCACTTAAATGGACGAATTTGCAAGAAGGGAGCATTCCAATCAGTCATGATTCTTAAAGCATCTGCCGAAGAAGCCTTTGATGAGCGCATTATTCCTTTCACTGACGTTGCAGCAGAAAAGGCGAAAGACAAAGATTCGGGCAATCTTCGAGTGGTGCTTTGTTCCACGCAAAAAGAGAAAGTACGAGAAGTACTAAACGTCCTCAAACACACGATGAGAGAAGATGTCATAGATTTTAGGCCGTCCGAAGTCACTCAGTGTCACCTGACGATGCGATCTGTTACTTCAGGGGCAAACAAGGTTGTTAGGCTTCGCCTGTTTCACAAATGGAGGTCTGGGGCAATTGGTCTTGACAGCAAGGattttgtctgttttgctgATTCATCCGGTGATGGGACTCCCATACCTGAAGCAGAATTTTTGGATTTTGGAGATCAACTGATACCTGGGGACGTAGCTCCCTCGCTGGTGAGAAAAGCTGCAGACTTGGGTTTAGAGGACCAAGCAACACCAGACGACGGACCTCTTTCGCTGGTGAGTCCTACTGCAAACTCCACAGGTACATTGGATCGGTATCAGATACACAAGCTGATGCAGTATGGAAAAACTGAGTATCACTTGCACCAGCACGTCACCCATATGCAAGGCCAGGTTTGTGTCGTAGGGGACAGAACTAACGCTACGCTGAACGATCAGTCGCCCAGTCAGTGCGCTCTTCCGGGAGGACCTAGTTCTGCTCCTCACAGAAGCATAACCGATGGAAAGAGATCACAAGAATCACTGCCGACACCCCGCGACGATTGGACATAAATTCTTATAGTACTCAGTGTATTTGTTTGATATCTGTCTAAGAGTCACCTTCATTATAGGCCATTACACTTACGATGTTGTCAAACTTATTATAGGGTGTTGAGTTAGGTATAGACTAAGGCTGGCTGacatccgatctcaccctaaaggagaattgtaaaccgccatgaaactatgtgatatgtgcggtatataaatccattaccattaccattaccattaccat

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00791	ZU5	ZU5 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000906	Domain	ZU5 domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03351	APC4, ANAPC4; anaphase-promoting complex subunit 4	-	Chromosome and associated proteins	ko03036	deepkoala