Detailed information of pspe_0.1.m1.9771.m1 in Pachyseris speciosa

Genomic Location: Sc0000024:2056283...2074388
NR annotation: KAJ7328615.1, F-box/LRR-repeat protein 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
C0HAC0F-box/LRR-repeat protein 5 OS=Salmo salar OX=8030 GN=fbxl5 PE=2 SV=1
Q2YDQ5F-box/LRR-repeat protein 5 OS=Danio rerio OX=7955 GN=fbxl5 PE=2 SV=2
Q5XGI3F-box/LRR-repeat protein 5 OS=Xenopus tropicalis OX=8364 GN=fbxl5 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|F-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR001810DomainF-box domainInterproscan
IPR045808DomainFBXL5-like, hemerythrin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13318UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0031146Biological ProcessSCF-dependent proteasomal ubiquitin-dependent protein catabolic processInterproscan
GO:0055072Biological Processobsolete iron ion homeostasisInterproscan
GO:0006879Biological Processintracellular iron ion homeostasisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10271FBXL5; F-box and leucine-rich repeat protein 5-Ubiquitin systemko04121deepkoala

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