Detailed information of pspe_0.1.m1.9940.m1 in Pachyseris speciosa

Genomic Location: Sc0000026:135082...166560
NR annotation: CAH3019548.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9H1Z4WD repeat-containing protein 13 OS=Homo sapiens OX=9606 GN=WDR13 PE=1 SV=3
Q6DKP5WD repeat-containing protein 13 OS=Pan troglodytes OX=9598 GN=WDR13 PE=3 SV=1
Q91V09WD repeat-containing protein 13 OS=Mus musculus OX=10090 GN=Wdr13 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001873FamilyEpithelial sodium channelInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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