Gene detail

Detailed information of pspe_0.1.m1.9966.m1 in Pachyseris speciosa

Genomic Location: Sc0000026:475914...483642
NR annotation: XP_020604453.1, helicase with zinc finger domain 2-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9BYK8	3'-5' exoribonuclease HELZ2 OS=Homo sapiens OX=9606 GN=HELZ2 PE=1 SV=7
E9QAM5	3'-5' exoribonuclease HELZ2 OS=Mus musculus OX=10090 GN=Helz2 PE=1 SV=1
Q09820	ATP-dependent helicase upf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=upf1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13086	AAA_11	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR039691	Family	Zinc finger CCCH domain-containing protein A/B	Interproscan
IPR041677	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14928	MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035196	Biological Process	miRNA processing	Interproscan
GO:0035198	Molecular Function	miRNA binding	Interproscan
GO:0004386	Molecular Function	helicase activity	Interproscan