Detailed information of scaffold1.g122.t2 in Morbakka virulenta

Genomic Location: scaffold1:4819735...4917373
NR annotation: XP_031566382.1, E3 ubiquitin-protein ligase TTC3-like, partial [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q94BY6RING-H2 finger protein ATL75 OS=Arabidopsis thaliana OX=3702 GN=ATL75 PE=2 SV=1
Q6NML0E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana OX=3702 GN=ATL76 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639zf-RING_2Ring finger domainDomainInterproscan
PF19179TTC3_DZIP3_domE3 ubiquitin-protein ligase TTC3/DZIP3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR043866DomainE3 ubiquitin-protein ligase TTC3/DZIP3 domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR17550E3 UBIQUITIN-PROTEIN LIGASE TTC3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP