Detailed information of scaffold1.g18.t2 in Morbakka virulenta

Genomic Location: scaffold1:835830...862988
NR annotation: MCG8035099.1, hypothetical protein [Candidatus Thiodiazotropha taylori]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q7ZVB24-trimethylaminobutyraldehyde dehydrogenase A OS=Danio rerio OX=7955 GN=aldh9a1a PE=2 SV=1
P565334-trimethylaminobutyraldehyde dehydrogenase OS=Gadus morhua subsp. callarias OX=8053 GN=aldh9A1 PE=1 SV=1
Q19A304-trimethylaminobutyraldehyde dehydrogenase OS=Oryzias latipes OX=8090 GN=aldh9A1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR029510Conserved_siteAldehyde dehydrogenase, glutamic acid active siteInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR016160Conserved_siteAldehyde dehydrogenase, cysteine active siteInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11699ALDEHYDE DEHYDROGENASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0004029Molecular Functionaldehyde dehydrogenase (NAD+) activityInterproscan
GO:0019145Molecular Functionaminobutyraldehyde dehydrogenase (NAD+) activityInterproscan
GO:0047105Molecular Function4-trimethylammoniobutyraldehyde dehydrogenase activityInterproscan

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