Detailed information of scaffold10.g149.t1 in Aurelia aurita complex sp. Pacific

Genomic Location: scaffold10:579856...595823
NR annotation: no NCBI-NR hit recorded
Species Aurelia aurita complex sp. Pacific · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01791
all species →
DeoCDeoC/LacD family aldolaseDomainInterproscan
PF03144
all species →
GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan
PF02885
all species →
Glycos_trans_3NGlycosyl transferase family, helical bundle domainDomainInterproscan
PF00583
all species →
Acetyltransf_1Acetyltransferase (GNAT) familyFamilyInterproscan
PF13541
all species →
ChlISubunit ChlI of Mg-chelataseDomainInterproscan
PF13481
all species →
AAA_25AAA domainDomainInterproscan
PF00009
all species →
GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF07831
all species →
PYNP_CPyrimidine nucleoside phosphorylase C-terminal domainDomainInterproscan
PF07662
all species →
Nucleos_tra2_CNa+ dependent nucleoside transporter C-terminusFamilyInterproscan
PF01676
all species →
MetalloenzymeMetalloenzyme superfamilyFamilyInterproscan
PF16658
all species →
RF3_CClass II release factor RF3, C-terminal domainDomainInterproscan
PF01048
all species →
PNP_UDP_1Phosphorylase superfamilyDomainInterproscan
PF00591
all species →
Glycos_transf_3Glycosyl transferase family, a/b domainFamilyInterproscan
PF07670
all species →
GateNucleoside recognitionDomainInterproscan
PF00702
all species →
Hydrolasehaloacid dehalogenase-like hydrolaseDomainInterproscan
PF18429
all species →
DUF5609Domain of unknown function (DUF5609)DomainInterproscan
PF01773
all species →
Nucleos_tra2_NNa+ dependent nucleoside transporter N-terminusFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036412
all species →
Homologous_superfamilyHAD-like superfamilyInterproscan
IPR002915
all species →
FamilyDeoC/FbaB/LacD aldolaseInterproscan
IPR004161
all species →
DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035994
all species →
Homologous_superfamilyNucleoside phosphorylase superfamilyInterproscan
IPR017459
all species →
DomainGlycosyl transferase family 3, N-terminal domainInterproscan
IPR020568
all species →
Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR000182
all species →
DomainGNAT domainInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR009000
all species →
Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR011343
all species →
FamilyDeoxyribose-phosphate aldolaseInterproscan
IPR000795
all species →
DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR024052
all species →
Homologous_superfamilyPhosphopentomutase DeoB cap domain superfamilyInterproscan
IPR013102
all species →
DomainPyrimidine nucleoside phosphorylase, C-terminalInterproscan
IPR004548
all species →
FamilyPeptide chain release factor 3Interproscan
IPR035647
all species →
Homologous_superfamilyEF-G domain III/V-likeInterproscan
IPR013785
all species →
Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR011657
all species →
DomainConcentrative nucleoside transporter C-terminal domainInterproscan
IPR004402
all species →
FamilyPurine nucleoside phosphorylase DeoD-typeInterproscan
IPR006464
all species →
FamilyN-acetyltransferase RimI/Ard1Interproscan
IPR023214
all species →
Homologous_superfamilyHAD superfamilyInterproscan
IPR013465
all species →
FamilyThymidine phosphorylaseInterproscan
IPR004469
all species →
FamilyPhosphoserine phosphataseInterproscan
IPR004504
all species →
FamilyDNA repair protein RadAInterproscan
IPR018090
all species →
FamilyPyrimidine-nucleoside phosphorylase, bacterial/eukaryoticInterproscan
IPR036566
all species →
Homologous_superfamilyPyrimidine nucleoside phosphorylase-like, C-terminal domain superfamilyInterproscan
IPR006124
all species →
DomainMetalloenzymeInterproscan
IPR032090
all species →
DomainPeptide chain release factor 3, C-terminalInterproscan
IPR010045
all species →
FamilyPhosphopentomutaseInterproscan
IPR035902
all species →
Homologous_superfamilyNucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamilyInterproscan
IPR018270
all species →
FamilyConcentrative nucleoside transporter, metazoan/bacterialInterproscan
IPR000845
all species →
DomainNucleoside phosphorylase domainInterproscan
IPR000312
all species →
DomainGlycosyl transferase, family 3Interproscan
IPR020588
all species →
DomainDNA recombination and repair protein RecA-like, ATP-binding domainInterproscan
IPR018016
all species →
Conserved_siteNucleoside phosphorylase, conserved siteInterproscan
IPR016181
all species →
Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR031157
all species →
Conserved_siteTr-type G domain, conserved siteInterproscan
IPR017872
all species →
Conserved_sitePyrimidine-nucleoside phosphorylase, conserved siteInterproscan
IPR041732
all species →
DomainPeptide chain release factor 3, GTP-binding domainInterproscan
IPR036320
all species →
Homologous_superfamilyGlycosyl transferase family 3, N-terminal domain superfamilyInterproscan
IPR043690
all species →
FamilyN-acetyltransferase RimIInterproscan
IPR011642
all species →
DomainNucleoside transporter/FeoB GTPase, Gate domainInterproscan
IPR017850
all species →
Homologous_superfamilyAlkaline-phosphatase-like, core domain superfamilyInterproscan
IPR005225
all species →
DomainSmall GTP-binding protein domainInterproscan
IPR041449
all species →
DomainPhosphoserine phosphatase, N-terminalInterproscan
IPR002668
all species →
DomainConcentrative nucleoside transporter N-terminal domainInterproscan
IPR038467
all species →
Homologous_superfamilyPeptide chain release factor 3, domain III superfamilyInterproscan
IPR014721
all species →
Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43556
all species →
PEPTIDE CHAIN RELEASE FACTOR RF3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016829
all species →
Molecular Functionlyase activityInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0003824
all species →
Molecular Functioncatalytic activityInterproscan
GO:0009116
all species →
Biological Processnucleoside metabolic processInterproscan
GO:0016747
all species →
Molecular Functionacyltransferase activity, transferring groups other than amino-acyl groupsInterproscan
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0004139
all species →
Molecular Functiondeoxyribose-phosphate aldolase activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0009264
all species →
Biological Processdeoxyribonucleotide catabolic processInterproscan
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0008973
all species →
Molecular Functionphosphopentomutase activityInterproscan
GO:0006213
all species →
Biological Processpyrimidine nucleoside metabolic processInterproscan
GO:0016763
all species →
Molecular Functionpentosyltransferase activityInterproscan
GO:0006415
all species →
Biological Processtranslational terminationInterproscan
GO:0004731
all species →
Molecular Functionpurine-nucleoside phosphorylase activityInterproscan
GO:0006139
all species →
Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0006474
all species →
Biological ProcessN-terminal protein amino acid acetylationInterproscan
GO:0008080
all species →
Molecular FunctionN-acetyltransferase activityInterproscan
GO:0009032
all species →
Molecular Functionthymidine phosphorylase activityInterproscan
GO:0006564
all species →
Biological ProcessL-serine biosynthetic processInterproscan
GO:0036424
all species →
Molecular FunctionL-phosphoserine phosphatase activityInterproscan
GO:0003684
all species →
Molecular Functiondamaged DNA bindingInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan
GO:0016154
all species →
Molecular Functionpyrimidine-nucleoside phosphorylase activityInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan
GO:0000287
all species →
Molecular Functionmagnesium ion bindingInterproscan
GO:0009117
all species →
Biological Processnucleotide metabolic processInterproscan
GO:0043094
all species →
Biological Processcellular metabolic compound salvageInterproscan
GO:0005337
all species →
Molecular Functionnucleoside transmembrane transporter activityInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:1901642
all species →
Biological Processnucleoside transmembrane transportInterproscan
GO:0016757
all species →
Molecular Functionglycosyltransferase activityInterproscan
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0140664
all species →
Molecular FunctionATP-dependent DNA damage sensor activityInterproscan
GO:0006206
all species →
Biological Processpyrimidine nucleobase metabolic processInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0016150
all species →
Molecular Functiontranslation release factor activity, codon nonspecificInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for scaffold10.g149.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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