Genomic Location: scaffold10:2235925...2349008
NR annotation: XP_015769688.1, PREDICTED: katanin p80 WD40 repeat-containing subunit B1-like [Acropora digitifera]
| CDS | |||||
| scaffold10.g54.t1 | |||||
| Transcript |
| scaffold10.g54.t1 |
| Protein |
| scaffold10.g54.t1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| O61585 | Katanin p80 WD40 repeat-containing subunit B1 OS=Strongylocentrotus purpuratus OX=7668 GN=KATNB1 PE=1 SV=1 | ||||
| Q6NVM2 | Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis OX=8364 GN=katnb1 PE=2 SV=1 | ||||
| Q4V7Y7 | Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis OX=8355 GN=katnb1 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13925 | Katanin_con80 | con80 domain of Katanin | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR026962 | Family | Katanin p80 WD40 repeat-containing subunit B1 | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR028021 | Domain | Katanin p80 subunit, C-terminal | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19845 | KATANIN P80 SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008017 | Molecular Function | microtubule binding | Interproscan |
| GO:0008352 | Cellular Component | katanin complex | Interproscan |
| GO:0051013 | Biological Process | microtubule severing | Interproscan |
| GO:0007019 | Biological Process | microtubule depolymerization | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K18643 | KATNB1; katanin p80 WD40 repeat-containing subunit B1 | - | Cytoskeleton proteins | ko04812 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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